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When all `objectivePriorParameters` are either empty or set to a single value, the respective column will be read with dtype `numpy.float64`, which may cause problems down the line as spec says this s…
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I would like it very much if the pypesto sampling results could also be used in arviz as it offers more visualization procedures
and also other diagonostic methods.
Especially when using the Emcee…
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**Which problem would you like to address? Please describe.**
It would be great if one could specify units for measurements (and potentially parameters) in PEtab in a systematic way. This would be …
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For a start, introduce a configuration file (ini format?) that is not mandatory to the PeTab format, but which the petabimporter can read in and translate to amici and pypesto options.
The specific…
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Good morning,
I am using the pypesto 'feature_hierarchical' branch on a WSL.
I tried the hierarchical estimation with a model including five observables with three scaling parameters, where every…
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Cannot validate the model with AMICI as the noise model is not supported yet.
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Currently there seems to be no elegant way of using output parameters (e.g. scaling parameters) that have not been defined in the SBML model.
Would be great if they would be automatically recognize…
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Hey, I just tried to build dMod on may Laptop, this is what I get:
```
==> R CMD INSTALL --no-multiarch --with-keep.source dMod
* installing to library ‘/home/daniel/R/x86_64-pc-linux-gnu-libra…
dlill updated
4 years ago
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Hi, mistakes in units can lead to unexpected simulation results and some times hard to interpret results. Dimensional errors happen quite often. Would it be too hard to add dimensional analysis to pys…
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Hi all,
in the condition table it should be clarified what happens if a parameter ID is provided for a parameter ID value:
https://petab.readthedocs.io/en/latest/documentation_data_format.html#condi…