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**Term to split:**
MONDO:0008345 'idiopathic pulmonary fibrosis'
- [x] obsolete MONDO:0008345 'idiopathic pulmonary fibrosis'
- [x] add new OMIMPS:
[Term]
id: MONDO:0031199
name: inherited int…
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`unimap` does a great job aligning complex regions (e.g. satellites) even using reads. We are using it to detect some variants at telomeric regions, using PacBio HiFi sequencing data.
We have evide…
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Processing of IES candidates in fuzzy mode to get consensus sequence is slow. Speed up with parallelization?
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I have two runs of HG002 with slightly different resolutions in the same genomic region with the same input data. The hifi graphs look similar, the new run:
![Screen Shot 2023-06-19 at 11 41 10 AM](h…
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Add links
- [x] Intro to Primer navigation
- [x] Section 5
- [x] Section 6
- [x] Section 7
- [x] 7-1
- [x] 7-2
- [x] 7-3
- [x] 7-4
- [x] Section 8
- [x] Section 9
- [x] Sect…
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Hi
We are evaluting the quality of raven assemblies using Nanopore V14 raw reads and we noticed errors close to window borders that we belive may be caused by racon. More specifically, after mapping …
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Hello,
I am running `pyrho` v0.1.7 to get recombination rates of hybrid species and their parentals. We are using whole genome resequencing data (vcf files of biallelic SNPs), with 25 individual. T…
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@TrStans606
(for de-novo telomere discovery)
Test data:
ERR2061611 through ERR2061624 and ERR2188722 through ERR21887226 are available from the European Nucleotide Archive.
The rest should be a…
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Dear prof. Heng Li,
Thank you so much for the tool! I have been using hifiasm since 2021, and am a big fan of it. I recently run into different results from different versions of hifiasm, and would…
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I am looking for "telomeric D-loop" on SO. I found a related term SO:0000297 which refers to the same D-loop (as far as the definition goes and at least structurally). Albeit the SO definition only re…