lbcb-sci racon issues - Githubissues

lbcb-sci / racon

Ultrafast consensus module for raw de novo genome assembly of long uncorrected reads

MIT License

197 stars 34 forks source link

issues

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CMake file doesn't recognize apple-m1 chips

#83 ephillips42 opened 3 months ago
1
Inquiry about usage

#82 AsmaaSamyMohamedMahmoud opened 3 months ago
0
Spoa upgrade

#81 tbrekalo opened 9 months ago
0
cuda 12 build fails with missing header pinned_allocator.h

#80 rfox-mbl opened 11 months ago
0
error: empty overlap set!

#79 mmnascimento opened 1 year ago
0
Does racon_wrapper lack --no-trimming option

#78 SalvadorGJ opened 1 year ago
0
--no-trimming leads to significant drop in BUSCO scores

#77 JWDebler opened 1 year ago
0
Polishing errors close to window borders

#76 fmlt opened 1 year ago
1
Reads extending over the edge of the contig

#75 diego-rt closed 1 year ago
1
tbrekalo_wfa: added wfa2 to cmake build; meson not supported yet

#74 tbrekalo closed 1 year ago
0
Use cDNA to polish exons

#73 SalvadorGJ closed 1 year ago
3
Polishing polished assembly -> invalid file format

#72 an22an closed 1 year ago
1
Segmentation fault (core dumped)

#71 iremdnzl opened 1 year ago
1
Polishing with racon using multiple input files?

#70 BioLaFu opened 2 years ago
2
Log Racon polish edits

#69 justdx opened 2 years ago
4
racon use large memory than that in raven

#68 xiekunwhy opened 2 years ago
2
error: unable to find subsampled sequences!

#67 ziczhang opened 2 years ago
1
Unequal lengths in sequence

#66 bioramg opened 2 years ago
3
warning: contig XXX might be chimeric in window XX!

#65 Neo-xbx-00 opened 2 years ago
2
Update CMakeLists.txt

#64 znruss closed 3 months ago
0
Fix SIGFPE on small number of overlaps

#63 jchorl opened 2 years ago
0
Racon fails to build on 1.5.0

#62 schorlton opened 2 years ago
12
Update build

#61 rvaser closed 2 years ago
0
Does not build with thread-pool 4

#60 tillea closed 1 year ago
3
Racon does not build against latest edlib

#59 tillea opened 2 years ago
8
Floating Point Exception on GPU

#58 schorlton opened 3 years ago
2
How to obtain Contigs from cDNA Nanopore Sequencing

#57 jkbenotmane closed 3 years ago
2
Can racon only fill gaps?

#56 zmz1988 closed 3 years ago
6
Raccon

#55 rajathrao2449 closed 3 years ago
1
racon_wrapper: Overflow and corrupting overlaps?

#54 EinarBaldvin opened 3 years ago
32
Re-enable GPU features in racon_wrapper

#53 schorlton opened 3 years ago
3
compilation with CUDA fails

#52 estolle opened 3 years ago
1
docker support

#51 huangnengCSU closed 3 years ago
2
SIGSEGV in test suite when using bioparser version 3.0.12, spoa version 4.0.6

#50 tillea closed 3 years ago
5
GPU option

#49 Kirk3gaard opened 3 years ago
1
update to latest bioparser

#48 mr-c closed 3 years ago
4
[racon] Update GenomeWorks to latest version

#47 tijyojwad closed 3 years ago
1
Error compiling racon

#46 asan-emirsaleh closed 3 years ago
3
BED feature

#45 isovic opened 4 years ago
0
[racon-gpu] update clara genomics dependency

#44 tijyojwad closed 4 years ago
1
Fixed a SyntaxError in racon_wrapper.py

#43 drs closed 4 years ago
0
Segmentation fault (core dumped)

#42 zhaoxvwahaha opened 4 years ago
7
report of the count of corrections

#41 splaisan closed 4 years ago
2
recommendations for read correction

#40 dcopetti closed 4 years ago
11
What will happen if draft contains stretches of Ns?

#39 ms-gx closed 4 years ago
6
How can I pronounce Racon?

#38 changhan1110 closed 3 years ago
1
Problem while installing racon on arm platform

#37 X-WJ closed 3 years ago
3
[cudaaligner] update cuda aligner max alignments calc

#36 tijyojwad closed 4 years ago
1
[cga] update cga version to 0.4.4

#35 tijyojwad closed 4 years ago
0
Meson2

#34 isovic closed 4 years ago
0