lbcb-sci racon issues - Githubissues

lbcb-sci / racon

Ultrafast consensus module for raw de novo genome assembly of long uncorrected reads

MIT License

203 stars 34 forks source link

issues

Newest

Newest Most commented Recently updated Oldest Least commented Least recently updated

CMake file doesn't recognize apple-m1 chips

#83 ephillips42 opened 6 months ago
1
Inquiry about usage

#82 AsmaaSamyMohamedMahmoud opened 6 months ago
0
Spoa upgrade

#81 tbrekalo opened 1 year ago
0
cuda 12 build fails with missing header pinned_allocator.h

#80 rfox-mbl opened 1 year ago
0
error: empty overlap set!

#79 mmnascimento opened 1 year ago
0
Does racon_wrapper lack --no-trimming option

#78 SalvadorGJ opened 1 year ago
0
--no-trimming leads to significant drop in BUSCO scores

#77 JWDebler opened 1 year ago
0
Polishing errors close to window borders

#76 fmlt opened 1 year ago
1
Reads extending over the edge of the contig

#75 diego-rt closed 1 year ago
1
tbrekalo_wfa: added wfa2 to cmake build; meson not supported yet

#74 tbrekalo closed 1 year ago
0
Use cDNA to polish exons

#73 SalvadorGJ closed 1 year ago
3
Polishing polished assembly -> invalid file format

#72 an22an closed 1 year ago
1
Segmentation fault (core dumped)

#71 iremdnzl opened 1 year ago
1
Polishing with racon using multiple input files?

#70 BioLaFu opened 2 years ago
2
Log Racon polish edits

#69 justdx opened 2 years ago
4
racon use large memory than that in raven

#68 xiekunwhy opened 2 years ago
2
error: unable to find subsampled sequences!

#67 ziczhang opened 2 years ago
1
Unequal lengths in sequence

#66 bioramg opened 2 years ago
3
warning: contig XXX might be chimeric in window XX!

#65 Neo-xbx-00 opened 2 years ago
2
Update CMakeLists.txt

#64 znruss closed 6 months ago
0
Fix SIGFPE on small number of overlaps

#63 jchorl opened 2 years ago
0
Racon fails to build on 1.5.0

#62 schorlton opened 2 years ago
12
Update build

#61 rvaser closed 2 years ago
0
Does not build with thread-pool 4

#60 tillea closed 2 years ago
3
Racon does not build against latest edlib

#59 tillea opened 3 years ago
8
Floating Point Exception on GPU

#58 schorlton opened 3 years ago
2
How to obtain Contigs from cDNA Nanopore Sequencing

#57 jkbenotmane closed 3 years ago
2
Can racon only fill gaps?

#56 zmz1988 closed 3 years ago
6
Raccon

#55 rajathrao2449 closed 3 years ago
1
racon_wrapper: Overflow and corrupting overlaps?

#54 EinarBaldvin opened 3 years ago
32
Re-enable GPU features in racon_wrapper

#53 schorlton opened 3 years ago
3
compilation with CUDA fails

#52 estolle opened 3 years ago
1
docker support

#51 huangnengCSU closed 3 years ago
2
SIGSEGV in test suite when using bioparser version 3.0.12, spoa version 4.0.6

#50 tillea closed 3 years ago
5
GPU option

#49 Kirk3gaard opened 3 years ago
1
update to latest bioparser

#48 mr-c closed 3 years ago
4
[racon] Update GenomeWorks to latest version

#47 tijyojwad closed 4 years ago
1
Error compiling racon

#46 asan-emirsaleh closed 3 years ago
3
BED feature

#45 isovic opened 4 years ago
0
[racon-gpu] update clara genomics dependency

#44 tijyojwad closed 4 years ago
1
Fixed a SyntaxError in racon_wrapper.py

#43 drs closed 4 years ago
0
Segmentation fault (core dumped)

#42 zhaoxvwahaha opened 4 years ago
7
report of the count of corrections

#41 splaisan closed 4 years ago
2
recommendations for read correction

#40 dcopetti closed 4 years ago
11
What will happen if draft contains stretches of Ns?

#39 ms-gx closed 4 years ago
6
How can I pronounce Racon?

#38 changhan1110 closed 3 years ago
1
Problem while installing racon on arm platform

#37 X-WJ closed 3 years ago
3
[cudaaligner] update cuda aligner max alignments calc

#36 tijyojwad closed 4 years ago
1
[cga] update cga version to 0.4.4

#35 tijyojwad closed 4 years ago
0
Meson2

#34 isovic closed 4 years ago
0