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Hello,
Thanks again for developing some useful tools. Is it possible that you can add some documentation-description of the output files in the results directory? Or is there somewhere where I can …
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I was looking for a way to limit plotting using `li.pl.dotplot` function to a selection of ligand/receptor complexes. But the plot function does not seem to offer that. What are my options?
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https://mp.weixin.qq.com/s/51PtUi7ZKp1nbrFGElU74A
ixxmu updated
10 months ago
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Hello @tanghaibao ,
I am struggling to interpret this output of ALLMAPS:
.
The number of colinearity blocks found by the MCscanX I'm using is…
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I'm trying to reconcile my contigs and ran into a problem at the pairwise identities check where a large proportion of my contigs have values of 59%. I'm hesitant to fix it by removing them since that…
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I used flye for an assembly for a strain with a deposited reference genome.
When comparing a Contig with its reference, I noticed that the Flye assembly is slightly shorter. In the reference there ar…
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Hey thanks for this tool. I'm getting the following error during the `run_genespace` step.
```
############################
1. Running orthofinder (or parsing existing results)
Checking …
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