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The package is great, thanks for developing this package, I would like to know if each classification shown here represents an ASV or a taxonomy level such as species and genus, etc.
![image](https:/…
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When we lived in London, I used to sprout various types of seeds on a regular basis.
The taste of sprouts takes a bit of getting used to, but given the nutritional density, it's worth it!
There a…
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Increased Abundance of Achromobacter xylosoxidans and Bacillus cereus in Upper Airway Transcriptionally Active Microbiome of COVID-19 Mortality Patients Indicates Role of Co-Infections in Disease Seve…
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**User Story**
As a course delivery team member, I want to be able to compare only courses that have specified course-level tag(s), so that I can compare courses that share something in common (subje…
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Recurrent urinary tract infection and estrogen shape the taxonomic ecology and function of the postmenopausal urogenital microbiome – Michael L. Neugent et al.– Cell Reports Medicine 2022
DOI:http…
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Hi,
I would like to know whether this tool can be used to identify multiple groups differential abundance microbes?
Thank you very much!
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Check that contributor list in DESCRIPTION is up-to-date (https://github.com/microbiome/mia/graphs/contributors). Do the same in miaViz and OMA.
At least these are missing in mia:
- @ShadmanIshraq…
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With the upcoming release of [QIIME 2 2021.4](https://github.com/qiime2/qiime2/pull/576) the underlying version of Python is being updated from 3.6 to 3.8. Hopefully this should allow BIRDMAn to be co…
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Would it be possible to add an option to filter read alignments by mapQ score? This can be useful for metagenomics datasets where many similar organisms are being compared.
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Dear Benjamin,
I am reposting issue #83.
I have the following set of samples (16S rRNA reads), which were sequenced together on the Illumina (MiSeq 2 x 300 bp) platform:
Soil: extracted/PCR/se…