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Hi,
I have an error during : Error executing process > 'RelativeAbundanceReducedTaxa (1)'
Here is the post I send to the qiime forum :
https://forum.qiime2.org/t/error-during-relative-abund…
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Hello,
I have been exploring and testing PureCN for our amplicon based targeted WES data for cancer patients data. While I was quite impressed by the clear documentations and implementations, I also…
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**Operating system**
Ubuntu 20.04
**Package name**
PBLAA 2.4.2
**Conda environment**
```
# Name Version Build Channel
_libgcc_mutex 0.1 …
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Dear Benjamin, I would like to ask a question about dada2,
I have a doubt about the step of merge:
Example code:
mergers_t1
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The link to get the primer list for sars-CoV-2 does not work
https://github.com/artic-network/artic-ncov2019/tree/master/primer_schemes/nCoV-2019/V3
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Hello,
I've been seeing large memory consumption (1467 MB for SRR6399464, for example) when downloading data using the following command:
`fastq-dump --disable-multithreading --fasta 0 --skip-tech…
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Hello, new user here. Installed latest version of Bismark(0.22.3), HISAT2 (2.2.0), samtools (1.10). Running analysis on data downloaded from BaseSpace that was previously analysed with another pipelin…
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Hello!
I am trying to align my raw 150bp paired end sequencing files to the mitochondrial genome. My mapping efficiency is
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I am aware of the many caveats of trying to do OTU richness with molecular microbial data; however, I am curious if the error correction of dada2 is removing too many of the low abundance reads to mak…
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As I've found out, all R1 sequences must be of the same length. R2 too. Is it necessary to have sequences in R2 files synchonized with sequences in R1 file (same number and order)? If I trim all R1 fi…