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on page http://mimirna.centenary.org.au/irfinder/database/ the example form data when submitted throws error:
```
: [Errno 2] No such file or directory: '/srv/www/htdocs/irfinder/database/results/…
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Hi,
Thanks for the zUMIs pipeline. I am using the current version (version 2.0.4) to analyze a SPLiT-Seq dataset, and it is giving the following error during the counting stage:
Error in sample.in…
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Can I omit this parameter when running `STAR alignReads`?
[--outFilterType BySJout](https://github.com/julienrichardalbert/MEA/blob/c33981de99dfd20f76fd5cd904e2f630eef0f4ae/src/scripts/mea.config#L12…
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In the tutorial there is this part:
> For the calculation of the events, SUPPA2 requires a GTF file. Here we provide one from Ensembl. The transcripts ids in our iso_tpm file should be equal as the…
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Hello,
I'm using sashimi plots to visualize and confirm events of alternative splicing in my RNAseq data.
But I'm having problems with the sashimi plot in IGV. Indeed, I tried to generate sashimi …
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Hi there,
When I ran Lafcutter to analyze brain samples' data, I received this AS for the "MAPT" gene:
![image](https://user-images.githubusercontent.com/26298242/40415676-c3057df0-5e7b-11e8-9368-8…
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I'm using Trinity in its genome-guided mode by providing a bam file produced by topHat alignment to the reference genome. Was wandering - what happens to reads which could not be aligned (~4%). Are th…
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Allow annotation of variants. Should behave similar to a sequence alteration, but with much additional data added to the schema based on information from the variant.
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Hello,
I get the following error during the splice junctions step:
Traceback (most recent call last):
File "/scratch/ahegde/pyQuilts/scripts/quilts_AH01.2.py", line 1965, in
translate(r…
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I am one of the developers of https://github.com/akka/akka/ and I just stumbled upon this nice library (I am a Rust lurker mostly). Futures are a very nice building block for asynchronous programs, bu…