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Is anybody working with SLURM implementation of openmopac for using clusters (boost + openmpi support)
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Hi, there:
I am trying to follow the Github instructions to test CovdGenotyper.
I am wondering wherther I should create a "data" folder in the same level as CovidGenotyper or within it.
The…
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hi Chao Shen,
i am creating another issue as this is different from the other one.
in your paper you mentioned that the performance varies depending on the protein. in real-world use-cases, we …
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- the sequence of Camelus_dromedarius_POU_class_5_homeobox_1_POU5F1_Oct4 is located here: [oct4 sequence](https://github.com/kacst-bioinfo-lab/labwork/blob/master/data/mariam/Camelus_dromedarius_POU_c…
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Requests to the mapping API now return the error `Error in fetching metadata`. The same queries work if the IDs are passed with the `query` parameter (space separated list) rather than as a file, whic…
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In order to explore transcripts information related to each variant, especially to calculate scores, need to create a "transcript view". It can be another table or a view (e.g. "transcripts"), which e…
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I ran GAG on a Augustus output of E.Coli and only find genes in the GAG output. Both transcripts and CDS (present in the input) are not transferred to genome.mrna.fasta and genome.proteins.fasta.
T…
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Hello Dportik,
I am currently using the HiFi-MAG-Pipeline pb-metagenomics-tools and have encountered the output file "JGI.filtered.depth.txt Output File" and have several questions.
What are t…
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Thanks for providing the updated scripts for keras 2.0. It's really a great help if the **script for the feature extraction** of proteins has also been provided. Show that user can make their own mod…
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Hi,
Many thanks for making this package available! I had an error as part of the funannotate predict step - it appears to be one that is mentioned in a previous issue #517 - however, I have the lat…