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This is more of a question than an issue but in bioinformatics there's growing momentum behind the use of workflow managers to run pipelines like you're got here. Here are some examples:
- https://…
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### Contact Details
_No response_
### Description of changes
[workbook-4.xlsx](https://github.com/ranchobiosciences/Data_Modeling_Issues_Templates/files/10812316/workbook-4.xlsx)
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### Contact Details
_No response_
### Description of changes
[workbook (9) (1).xlsx](https://github.com/ranchobiosciences/Data_Modeling_Issues_Templates/files/10709110/workbook.9.1.xlsx)
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## Description
As a bioinformatician, I would like to see what the DNA methylation looks like across all cells in a data set, in a small-ish region, in order to see the data underlying DMRs, enrich…
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Briefly comment on this issue why you'd be interested in this project.
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We'd like to be able to determine at a glance if any samples failed QC checkpoints in the pipeline.
Produce a summary file that reports Pass/Fail status for each sample, for each QC checkpoint. The…
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This is a staging place for stuff to add to the Reconstrue Handbook, for how to use these tools.
- [Evaluation of UMAP as an alternative to t-SNE for single-cell data
(2018)](https://www.biorxiv.o…
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This might not be an issue for feature tables from genbank, but for other sources (for example from prokka), a particular row may contain more than two lines. For example in the following it would be …
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Hi all,
I'm starting a faculty position in a few weeks, and I wanted to run some things by this group. I'm starting at a primarily undergrad institution (~9 Master's students), with immense support…