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**Describe the bug**
I have used miloR before and have got it to work fine, thanks it is a great tool!
Now, I have a single nuc RNAseq dataset comprising 6 subtypes of fibroblasts. I have perform…
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Establishment of a non-Westernized gut microbiota in men who have sex with men is associated with sexual practices – Kun Huang – Cell Reports Medicine
https://www.cell.com/cell-reports-medicine/ful…
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Hi,
I've been trying to work out what output from coverm would be best for conducting differential abundance analysis of genomes between groups, but I have been struggling to get my head around it.…
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Hello, the Differential Progression section is quite intriguing. I'm curious whether this section has a theoretical foundation; from what I've come across, population balance analysis seems relevant. …
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Leave below as comments your memos that grapple with the topic of AI inspired by the readings, movies & novels (at least one per quarter), your research, experiences, and imagination! Also add a thumb…
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Jacobs, J.P., Lagishetty, V., Hauer, M.C. et al. Multi-omics profiles of the intestinal microbiome in irritable bowel syndrome and its bowel habit subtypes. Microbiome 11, 5 (2023). https://doi.org/10…
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This issue will collect all feedback submitted via the feedback form at the end of each tutorial
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Results have been [aggregated](https://nbviewer.jupyter.org/github/bebatut/galaxy-training-m…
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Dear developer,
I'm confused about the P-value adjustment in Cell-Cell Interaction Analysis.
Could you help me explain what 'correct_axis ' means and how to set this parameter in different condition…
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Hello,
Thanks to have published the ANCOM-BC tool.
I wonder why ANCOM-BC doesn’t do all possible pairwise comparisons?
For example for the variables “nationality” and “BMI” in your Bioconduc…
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Hello!
I'm running into the following error when trying to run get_DE_info
Error in muscat::pbDS(pb, method = de_method_oi, design = design, contrast = contrast, : Specified filtering options re…