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貼吧活動:(請查閱 [SARS-CoV-2 Timeline by 2020.02.21](https://github.com/agorahub/_meta/blob/agoran/theagora/sari/Memorandum_2020-02-21_SARS-CoV-2-Timeline_Nathan.pdf?raw=true), by Nathan :cloud: )
- Colla…
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Update the following URL to point to the GitHub repository of
the package you wish to submit to _Bioconductor_
- Repository: https://github.com/snaketron/ClustIRR
Confirm the following by editi…
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Hello
I am getting a permanent error in two of the functions
```
> gsea_EAE gsea_EAE
```
I am sure `c1.all.v7.4.symbols.gmt` is in the path
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Dear kmayerb,
I have some questions about the tables of metaclonotype centers, which was generated as "centers_df" by the "bkgd_cnt1_nn2" function.
In that table, there are columns named "TR", "…
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Hello Nick,
I am trying to combine contigs from scRNA-seq data that I reconstructed using the TRUST4 pipeline. I used *_barcode_report.tsv and the command lines as follows bellow. It returns me the…
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Hello,
Thank you so much for creating such a great package, it is making my life much easier! I am analysing 5P 10x data from human T cells and am using scRepertoire to compare the TCR repertoire …
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Hello all
I have only **_scRNA-seq 10x PBMCs_** of cancer free and controls.
My boss has asked me
T cell analysis – differences between samples (scRNAseq)
Can we identify a/b or g/d pairs f…
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Hi
I need your personal point of view please
I have two `bulk RNA-seq` patients (PBMC) on which I run `mixcr`
For the same two patients I have `5' single cell` on which I run `TRUST4`
I a…
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Dear Nick,
There are several ways to calculate the Shannon index but they affect the interpretation of the outcome, for example if we give a score 0-1, 0 would mean high diversity and 1 less divers…
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Hi,
thank for develop this tool.
I'm trying to understand the way how you performed the repertoire classifier for CheckMate-038 dataset.
In particular, I'm wondering:
1) how many sequences Dee…