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### Week 1 - Get to know the community
- [x] Join the communication channels
- [x] Open a GitHub issue (this one!)
- [x] Install the Ersilia Model Hub and test the simplest model
- [x] Write a motiva…
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Hello,
I am running Sequeezemeta on metagenomics data generated by ONT sequencing (RNA microbiote, de novo sequencing). I have run sequeezemeta in sequential mode on two samples with option -a flye…
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Hi,
I'm new to Kaiju and would like to test it for our purpose as alternative to Qiime.
The installation was straight forward (thanks!) however when downloading the NCBI database, the kaiju_db.fmi fil…
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Dear faylward, I recently tried to reconstruct NCLDV bins from my metagenomics.
I mainly refer to methods in your article "Dynamic genome evolution and complex virocell metabolism of globally-distri…
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```
$ canu -p serum -d /lustre/project/taw/ONRPan/canu/serum genomeSize=4.8m maxInputCo
verage=100 -nanopore serum.fastq
perl: warning: Setting locale failed.
perl: warning: Please check that your…
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I run command as fellow:
cd ~/20T/DataBase/SoftwaresEnsembel/MAG
git clone --recursive https://github.com/EBI-Metagenomics/emg-viral-pipeline.git
export PATH=$PATH:~/20T/DataBase/SoftwaresEnsembe…
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Dear all,
I am using SortMeRNA in a pipeline for viral metagenomics on a SLURM cluster, with 22 cores and 200 GB RAM. I have two 6 GB paired-end compressed fastq files to analyze, and 171 740 538 t…
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[Metagenomics_Analysis](https://github.com/bioinformatics-hub-ke/BOSS-miniprojects/tree/main/Metagenomic_Analysis)
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I'm trying to scan my dataset for RNA viruses but I'm getting an error.
The command I ran was the following:
```
virsorter run -w ${OUT_DIR} -i ${FASTA} --min-length 1500 -j ${N_JOBS} --include…
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Hello,
I run your workflow on 60cpu -- 500go RAM machine using slurm manager and a singularity install but my job crash at 50% of compleness.
The slurm.err file display the following error mess…