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Title of each atlas (in the top left hand corner) becomes a dropdown menu so we can move easily between parcellations. For example, I am in Glasser parcellation, I click the title "Glasser parcellatio…
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A cached spec with booleans (e.g. an attribute where required=False) is written as required: "false" (false as a string instead of a bool). This writes without error but causes a build error when it i…
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Where can I find the `hungarianMatch` function?
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A random color is generated for brain areas if they have no explicit color assignment using the "rgb" attribute. Currently, this color generation is based only on labelIndex, which is very often ident…
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steps to reproduce:
1/ go to
expected behaviour:
search param cleared, message shown that template selected does not exist
actual beahviour:
search param not cleared, no information on…
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```
Will retrieve a list of gene acronyms from Allen Atlas now.
This may take a minute.
Traceback (most recent call last):
File "aioserver.py", line 25, in
import brainscapes
File "/…
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Hi,
Using the gradient_in_euclidean function, we can clearly note the area that has not been covered in the scan as seen by the grey mask. However, the plot_hemispheres mask uses dark blue which is t…
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Only pd.concat(join=inner) (if reindexed) or Gif Parcellations that already exist in all_combined_gifs
this avoids excess addition of false localising values to irrelevant regions
related to t…
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replace `$subjdir/T1/transforms/parcel_to_T1` with `$subjdir/T1/labelled_GM` in this line here:
https://github.com/McIntosh-Lab-RRI/tvb-ukbb/blob/bc0d49c5298b816bb761042a8b6843d4e9b03da1/bb_diffusio…
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Using neuprint or some other method, is it possible to associate a precise ROI (especially a non-primary one) to the soma of each neuron?
I found [this mention of an h5 file](https://connectome-neupr…