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Hi there, I discovered that, at least on our machines, Relion 3 and 3.1 (both) are entirely unable to run GPU-accelerated 3D classifications if the --zero_mask option is not used.
I attach a simpl…
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While checking the procedures for gentle cleaning in pipeliner.cpp, I came across a small code duplication in https://github.com/3dem/relion/blob/44d57634c042d240c9449227ca3bc5e3481d8b14/src/pipeliner…
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After updating to the latest relion plugin, I noticed that my bayesian polishing training jobs are labelled 'bayesian polishing' and my bayesian polishing jobs are labelled 'bayesian polishing trainin…
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I am trying to run 'xmipp - subtract projection' in Scipion 3.0.7. It fails with the following error:
00001: RUNNING PROTOCOL -----------------
00002: Hostname: xxxxxx
00003: PID: 8268
…
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Hi!
I possibly found a minor bug running relion_import from terminal:
relion_import ignores --ofile flag and uses default name
test command:
`which relion_import` --do_movies --optics_group_…
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In RELION 2, do_all_reconstruct_ctfs.sh crashes when the box size is 22, 24, 26 with this message:
`Segmentation fault (core dumped)`
Strangely, odd size boxes (21, 23, 25, 27) all work. This is p…
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XSEDE Science Gateways,
XSEDE is in the process of rolling out an enhanced Community Software Area “CSA” capability.
We are looking for one or more XSEDE Science Gateways that install applicatio…
monaw updated
3 years ago
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So far, we haven't paid any attention to the need to rescale data
A world coordinates system has been implemented in napari/napari#1539 which we can definitely take advantage of but we also need to…
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**The problem:**
We are 3D refining our polished particles using Relion 3.1, so we are at the end of our processing workflow (or at least getting there), but the step is not finishing correctly but e…
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Originally reported by: **Lu Gan (Bitbucket: [lu_gan](https://bitbucket.org/lu_gan), GitHub: Unknown)**
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The current version of this script will fail to creat…