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Given the otherwise comprehensive nature of this table, I suggest that it should explicitly contain the primer sets used for amplification. Having explicit fields for them would ensure that they are p…
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With an eye toward running through CEABiGR pipelines
64 samples total - PRJNA744403
https://www.ncbi.nlm.nih.gov/bioproject/?term=PRJNA744403
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Hi,
I've run into a problem that seems to be difficult to solve.
I have to say that when I installed sra-tools 3.0.2 this morning, the prefetch feature worked, the only drawback was the slow dow…
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Hi,
When I use prefetch to download scRNAseq sra files, several additional files such as CM000663.2 are downloaded. The log says:
2023-03-16T07:09:18 prefetch.3.0.3: Downloading via HTTPS...
20…
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Hello! I run the rawdata of NA12878 download from [NCBI SRA](https://trace.ncbi.nlm.nih.gov/Traces/?view=run_browser&acc=ERR1905890&display=data-access) []() and I got it's capture kit is Agilent_V5.
…
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Hi there,
I am getting an error while using Finder with RNA-Seq data available in my local directory. Here's the error:
```
cat: /elegans/Finder/FINDER_elegans/alignments/SRR9265068_round3_SJ.…
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Hi,
I'm trying to run the following command:
```
sratoolkit/bin/fastq-dump --gzip --split-files SRR16620365
```
However, I keep having the following error:
```
2023-02-07T00:41:20 fastq-d…
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You have already done this through this sheet https://data.argosdb.org/ARGOS_000009 - what you can do is update the BCO language (title, usability domain, etc.), file name, and IO Domain) + update the…
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The build of `tools/external/driver-tool/sratools.cpp` fails due to an undefined `ENV_VAR_PARAMETER_BITS` constant.
```
cd /theia/scratch/brussel/vo/000/bvo00005/vsc10122/easybuild/install/skylake…