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Sub-lineage of: XBB.1.9
Mutations on top of XBB.1.9: C12970T,G3242A(orf1ab:G993S),C23664T(S:A701V),T23018C(S:486P),C11956T
GISAID query: C12970T,G3242A,C23664T,T23018C
No. of Sequences: 100 (Austra…
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![image](https://github.com/sars-cov-2-variants/lineage-proposals/assets/78371872/b10ea47e-29a2-4ecc-bef6-0c1cef41ea77)
first sequenced: 3-30-23
Most recent Sequence: 4-26-23
EDITED by mod.: …
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1) the readme has recombinants, the tree (data.json) doesn't
I've recognized first time seeing that readme has XBG but searching through data.json I don't find it.
More obviously: In commit 3619…
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# Steps to recreate
1. On https://outbreak.info/compare-lineages: click "Change Lineages"
2. In Box 3, select "XBB.1.5"
3. This will then add XBB.1.5* [Omicron (XBB.1.5.X)], when it should have add…
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[Line 2605 - 2607](https://github.com/corneliusroemer/pango-designation-dates/blob/main/data/lineage_designation_date.csv#L2605) have the wrong designation code assigned to them.
lineage | designa…
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BQ.1.1.38, (spotted by @ryhisner very early months ago) is accordingly to Collection24 ( the covspectrum collection of all the designated lineages) the fastest among the BQ* descendants along with the…
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**Defining Mutations:** XBB.1.16 > C27509T(ORF7a:T39I)
**Query:** C29386T, A28447G, C27509T, -G284A, -T29410C, -A4681T, -C24382T, -G420T, -T3802C
**Earliest seq:** 2023-03-08 (EPI_ISL_17270013, Guja…
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It appears the lineage_data.full.json has not been updated for about a month. Based upon the text on the [Pango website](https://cov-lineages.org/lineage_list.html), this JSON file should have the "fu…
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Proposal for a sublineage of XBB.1.5
Earliest sequence: 24.12.2022 (USA)
Countries detected: USA, Irland, Scotland, England, Austria
Defining mutations:
S:P251S = C22313T
Gisaid query: A20118…
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We discussed using either XC, XD, XAB (because it is a major component of the XAG plot we are showing), or XS (a deltacron variant)