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@RLovering @ValWood
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Dear authors,
I find your paper very interesting to follow. I appreciate that you release the code.
However, when I use it with my own data, it throws the following exceptions:
```
File "run…
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What's an appropriate protocol for enforcing chromosome territories (ie. if we have 2 copies of `chr1`, then the two fibers reside in distinct locations in the nucleus)?
My question is: is this bui…
b2jia updated
2 years ago
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https://mp.weixin.qq.com/s/zygl7jy-GWD0h4J9eM3ZJQ
ixxmu updated
2 years ago
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https://mp.weixin.qq.com/s/dB_TvZSaUpMsnW89INog_A
ixxmu updated
2 years ago
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Hello,
There is a MF for histones, GO:0030527 structural constituent of chromatin; however there are no InterPro annotations to this. @blazaropinto @sarach06 would you consider adding this functio…
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* **IPR031120**
* **Q09589 hira-1(Caenorhabditis elegans) Protein HIRA **
* **I think the associated GO BP term should be changed to
GO:0006355 regulation of transcription, DNA-templated
based…
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Hi,
Thanks for your impressive tools! I have used it without error some years ago but using the same conda environnement now it did'nt work, see the error below :
```bash
Exception in thread …
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Hey,
like in issue #937 I am still trying to create a chromatin assay. I checked that I am using now using the count matrix as input. My new row- and colnames are the following
`head(rownames(ATAC…
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i am sorry to bother you.
My code is as follows
```
source ~/app/anaconda3/envs/mgatk/bin/activate
mgatk tenx -i /Sshare/tianchen/AML/3_sample_buce_merge/ZLH_10x_2/outs/possorted_bam.bam \
-n …