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# Tasks
Welcome to the HCA DCP! We are pleased to introduce you to the data wrangling team. Before beginning to work by yourself, you'll be asked to complete a set of tasks and meetings. These will …
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### Description of the bug
Starting the pipeline with the following command:
`nextflow run nf-core/smrnaseq --input experiment_info.csv --outdir long_run_test --genome GRCh37 -profile conda -r 2.1…
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I made the test NOPASS after this (happens repeatedly)
http://mr-0xe4:8080/job/h2o_master_DEV_runit_medium_large/1022/console
http://mr-0xe4:8080/job/h2o_master_DEV_runit_medium_large/1022/artif…
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### What happened?
I'm trying to run the test case and get errors (see below). Does that point to a problem on my side or a bug in the code?
Any hint how to proceed would be appreciated.
My OS is…
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### Description of the bug
Hi
I need your help
I couldn't find a description of the bug in troubleshooting
I am going to use rnafusion for the analysis of RNA-Seq paired-end cancer data. First…
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https://github.com/harvard-lil/capstone/blob/61971f22cf2d35ee4ae38e21a9f67c3f1a45756c/capstone/fabfile.py#L1302 checks whether extracted citations include a target_case is in_scope, but not necessaril…
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Hellow wwood, I successfully installed the software Singlem and specified the database path, but when I run it in command line, it prompts that DIAMOND failed. Is it because my computer doesn't have e…
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In order to better evaluate the integration methods on scpca datasets, we want to incorporate cell type information where possible. We want to use the Gawad data which has matching CITE-seq data so th…
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Hey thanks for the package. I was reading the dictys paper on bioarxiv and it says
To reconstruct a context specific GRN for each group of cells, Dictys first infers TF binding sites in regulato…
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**Describe your problem**
When I compile relion 5.0, it can't pass the step in "make -j 10"
**Environment:**
- OS: Ubuntu 22.04.3 LTS
- MPI runtime: OpenMPI 4.1.2
- RELION version: 5 (ca…