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[BTB001_S140.errlog.txt](https://github.com/user-attachments/files/15951736/BTB001_S140.errlog.txt)
Please help resolve this error. I have attached one f the errlog.txt files
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Hi there,
Can I use trgt to call repeat expansions from short read data (illlumina data for example) ? If yes, is there any caveat?
Thanks in advance.
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Hello,
I am trying to download sequences from a set of species with the following code:
crabs db_download --source ncbi --database nucleotide --query 'ITS2[All Fields] AND its2[All Fields] AND …
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VPIPE_BASEDIR = /opt/V-dock/V-pipe/workflow
Importing legacy configuration file vpipe.config
MissingSectionHeaderError in line 107 of /opt/V-dock/V-pipe/workflow/rules/common.smk:
File contains no …
dstcr updated
2 years ago
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The list of supported clades, which is written down in `mappings.csv`, was taken from nextclade-data, and contains three Delta clades: 21A, 21I and 21J. The latter two do not map to single pango linea…
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When I try to run the example files the program crashes when it tries to use picard, it might be something with the input file it cannot find. It only produces an empty sample.bam output file before i…
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Hi,
I would really like to try out your analysis method but am having a problem with running the test data. When running the dafga_refDB.py script I get the following error:
dafga_refDB.py -gp pmoA_…
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Dear developer:
I can't understand how to calculate the contig and bin's abundance? w…
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The `join` command currently just takes the union of positions and reads kept. While this is useful for joining non-overlapping amplicons, it will not treat primer binding sites correctly if the ampli…
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Hi，i use the arriba to detect the fusion and arriba is useful , and i also have some question about the arriba .
The option -U MAX_READS :Subsample fusions with more than the given number of supporti…