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-- Fedora 26
-- Boost version: 1.60.0
-- htslib & samtools version: 1.5
```
$ ctest --output-on-failure -R Unit.dng::regions
Test project /home/jgar/workspace/denovogear/build
Start 27: Un…
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Hi everyone! As we get ready for the event this weekend, I'd like to start preparing potential issues that team members can take on. To help with that (and to start getting to know each other), could …
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Hi,
I have noticed that boot.ppfst fails and gives an error message if populations are not sorted.
The issue is easy to solve by sorting the dataframe according to the pop column.
Cheers
Juan
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I propose to change all instances of 'protein clusters' in our pangenomic workflow with 'gene clusters'.
## Summary of the discussions so far
_I will keep this section up-to-date, the original i…
meren updated
6 years ago
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Hi Thierry,
I'm trying to impute a set of ddRAD SNPs (not a huge set, see details in the output), but it fails, giving the following output:
```
GBS_data$imputed.data sessionInfo()
R version 3.…
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Hi Paul,
I launched a bunch of jobs to "short" and noticed that sometimes they instead launched to juplow. I just wanted to make you aware of this, I think they are running fine, but they are not n…
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module adding python/2.7/pysam/0.8.3 works on flh1 but not flh2 after CentOS6 update to CentOS7, is there something I should be doing differently?
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I'm going off the code posted here:
https://github.com/allenday/spark-genome-alignment-demo/blob/master/bin/bowtie_pipe_single.scala
I've made some changes successfully to accommodate changes in t…
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In order to augment the visibility of the workshop, we discussed having @sammyjava first make any desired updates to the survey (he has already done the "who are you, please?", and if we don't hear of…
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We agreed that in 0.4 we'd try to sketch out the broad brush strokes of the API so that we can generate additional work items and investigations. This work item tracks doing this.
FWIW, here is a …