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Downloading csv files from https://virjendb.uni-jena.de/Downloads via curl or wget only worked when disabling certificate checking . This causes integration issues.
e.g.,
```
curl -I -L "https:…
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Hi!
I am currently using PhaGCN2.3.0 for phage classification. I have previously used PhaBOX on geNomad classified viral contigs with length filter of 3000 bp (I will later only take the prediction…
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Hi,
First of all, thanks for the tool !
I wanted to have your insights on using the tool to screen viruses (bacteriophages) for AMR genes.
Best,
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Hello,
Since your manuscript indicated the VIBRANT could recover both phages & archaeal viruses, I was wondering where I can find the information on if the identified viral scaffolds being bacterio…
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I want to predict the phage-host using the SPacePHARER a tool developed by your team. I have metatranscriptome data and want to screen the bacteriophages. My question is what will be the .fas file (sp…
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Hello Adrian,
You and your team made a fantastic work with PhANNs. I like the methodology which you adopted and I hope to see newer extended version soon.
I'm trying to resolve bacteriophages st…
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Hello, I installed the software following the installation procedure and modified the contents in software.list as shown in Attachment1.png.
![Attachment1](https://github.com/WenchenSONG/Prophage-Hun…
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Hi Christian,
I've encountered a primary issue while working with the genus Streptococcus and its bacteriophages. I have collected 136 bacterial genomes of the Streptococcus genus and 712 annotated…
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Please provide as much information as you can:
* **Suggested term label: ** virion envelopment
* **Definition :** The process in which a virion acquires an envelope from the host cell.
* **R…
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Hi,I use phagcn2 and phabox to do the classification for the same fasta files, but it shows me very different result,Im not sure which one can be trust