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# Feature Request: Comprehensive Export/Import Functionality for Datalake Table Management
## Overview
First and foremost, thank you for your incredible work on the seafowl project. Your efforts i…
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Input of definitions and list of values can be found:
https://github.com/pha4ge/Wastewater_Contextual_Data_Specification/tree/main/Template
The following table combines the info from above and add…
edsu7 updated
1 month ago
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Has Mpox clade I been designated as Clade Ia and Clade Ib? And is this being reflected in the nextstrain? If so, what mutations are considered? Please, assist. Thank.
Walter
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The annotation DB will contain many different targets, and it would be interesting to be able to easily see / query those definitions. This could also potentially lead to re-use of definitions for the…
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I'll have a go at adding these:
1. Tests which are not normally run, as they require online access
a. Check that definitions in `_OZglobals.py` (e.g. `wikiflags` and `src_flags`) match the vers…
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At present the ontology IRI for the gators example is defined as `http://phyloref.org/clade-ontology/gators.owl`. This was probably meant to anticipate the base URI of the Clade Ontology, but it suffe…
hlapp updated
3 years ago
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This will likely take some pretty sophisticated regular expressions, so we might want to wait until we have a better idea of what clade definitions (particularly those in RegNum) look like.
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- If you select a crown as a specifier there has to be a definition for the crown - pick from list
- Only non-apomorphy definitions can use crown as a specifier
- Example:
- If there is a crown d…
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Because ncov clades don't contain aa mutations anymore, I stopped passing aa node data to augur clades.
Turns out this causes an error - somewhat unexpectedly since it'd be possible to check whethe…
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Right now, the documentation for augur clades is lacking.
The docs section contains nothing but the CLI help: https://docs.nextstrain.org/projects/augur/en/stable/usage/cli/clades.html
There's a…