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**- Describe the feature:**
Dear author,
Could you please advise where or how I can obtain the FDR information corresponding to each peptide? Also, how can I obtain all unfiltered peptide inform…
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hello, good software, easy to use until I can not find q value settings, there is no option for setting q value or FDR threshold for final quality control of the results, or did I miss it ? I check ev…
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Thank you for the amazing contribution of DIANN. I am picking up on the recent release of diaTracer through FragPipe and am working off of their included peptidomics workflow that builds a single libr…
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Hi,
Is there any way to estimate FDR values >.20 more precisely?
I can accept that my results aren't significant, but ALL 1300 geneset, tissue enrichment, or gene prioritization FDR estimates are…
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Ciao, vi scrivo in merito ai campi in oggetto per l'invio fdr REST, con mappatura all'attuale servizio SOAP; di seguito SANP 3.7.1 in merito:
receiverReceiver (object)
id string
[XML FlussoRive…
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When we run FIRE_v0.06, we noticed different peak counts displayed in the 'FDR-peaks/peaks-vs-percent.pdf' that do not match one another and also do not match FDR-FIRE.bed.gz. The numbers are usually …
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Hi,
Thank you so much for creating such a wonderful bioinformatic tool.
I ran FIRE (v0.06) on the same bam file (hiphase output) twice with exactly the same environment/script, and the number of …
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ERROR: Unable to receive message from FDR 3A0838A8 (-4). 0/2 bytes
Iphone 11
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지난주만도 문제 없었는데, 오늘부터 갑자기 fdr.StockListing('KRX') 를 비롯하여 KRX 가 들어가는 대부분의 데이터프레임 읽기가 오류 발생중입니다.
ETF/KR 이라든지, S&P500 등 다른 시장 데이터는 문제 없습니다. KRX 관련 데이터에만 문제가 발생중이네요.
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Hello!
I tried to run this line:
`run_pathfindR(input, adj_method = "fdr", iterations = 10, n_processes = 4, gene_sets = c("KEGG", "Reactome","GO-BP", "GO-MF"))`
But it returns an error:
E…