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I have tried running every module and end up with similar errors every time. The docker worked very well a few months ago, but something has changed which is very surprising given the idea of containe…
smped updated
4 years ago
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Hi, Thanks a lot for your best HHpred. It is very useful.
When I use the websit version of HHpred: https://toolkit.tuebingen.mpg.de/tools/hhpred
There are a lot of database.
Could you also help t…
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We should search with HHPRED for all queries independent of alignment depth of search.
Just as an alert rather than to use and not to be put in web server.
( Current status with alignment search is …
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Hello
I'm working on ConSurf in Nir Ben-Tal's laboratory. The ConSurf website uses a local installation of hhsuite. It has worked for many years but lately it stopped working. In order to see where…
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Hi, I work in a HPC platform where where users do not have write access the globally installed software stack. As hh-suite is right now, users cannot set the databases path for hhpred, and therefore w…
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Hi Dr @frihaka !
First of all, I would like to congratulate and thank you for making TASmania and TASer.
It is very helpful!
I would like to ask the information regarding some Toxins since I c…
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I am running the script `scripts/hh_reader.py` individually to parse `hhr` files as downloaded after running a HHPRED server query. The printing fails with a `TypeError`
## Expected Behavior
Print…
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:exclamation: Make to check out our [User Guide](https://github.com/soedinglab/hh-suite/wiki).
## Expected Behavior
The -i flag of mkdssp should include a dssp filename
## Current Behavior
The…
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:exclamation: Make to check out our [User Guide](https://github.com/soedinglab/hh-suite/wiki).
## Expected Behavior
hhmakemodel.py is giving the not giving correct alignment file.
"Error while …
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