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Dear CAMISIM team,
I am starting to try and use CAMISIM for a bunch of projects we have, but wonder if all of them will fit. For instance, is it possible to use CAMISIM for simulating amplicon sequ…
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# Metabarcoding Data Toolkit
[GBIF nodes invited to join the pilot for metabarcoding data on biodiversity](https://www.gbif.org/news/3gm3lJaUQgTKZJRm6TiBff/gbif-nodes-invited-to-join-pilot-for-meta…
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Hi,
Does Melon accept FastQ files from long-read metabarcoded data?
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### Checklist
- [X] There are [no similar issues or pull requests](https://github.com/taxprofiler/taxpasta/issues) for this yet.
### Problem
A simmilar issue of different file formats exists for am…
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Hello,
Firstly, thanks for an interesting paper to read this morning!
I usually work with Nanopore data in a metabarcoding context, and was wondering if you have any idea how effective S-conLSH…
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We are planning to benchmark a set of metabarcoding tools and I thought to use OPAL. When investigating the tool, I thought one could use it for metabarcoding assessment just as well as long as one ca…
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### Description
If inputs are missing for the process `FOODME2:REPORTING:HELPER_SAMPLE_REPORT` then piepline fails with following error messsage:
```
WARN: Input tuple does not match tuple declar…
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Hi @geraldinepascal,
I’m excited to use the FROGS workflow v5, but I’ve encountered several issues during installation and running the workflow on my laptop (local machine) and a SLURM server usin…
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Great package! Trying to establish its applicability to my research. I'm doing DNA metabarcoding of eukaryotic community DNA and I've processed my reads into OTUs. I'd like to use decontam (or a simil…