-
-
Nice job you have done! I noticed in your article that you have done some work on protein property prediction. Could you please upload the code for this kind of task, or give me some advice on how to …
-
Hey, just a thought. You could probably do something similar with the new gLM2 and Sergey's "Categorical Jacobian" method, and this would be very useful for filtering binders designed by RFdiffusion, …
-
Thanks for providing the AF3 source!
To test AlphaFold3 using the example 7BBV provided by AlphaFold3 server, I used the following JSON file as input:
```
{
"name": "7BBV",
"modelSeeds": …
-
Until now, we have only used our framework for ChEBI, but in principle, it should also be applicable to other data sets and prediction tasks. One such task is the prediction of protein functions as sp…
-
Hello, I apologize for the disturbance. Thank you for creating such excellent software. However, while using TEsorter, I found that it only annotates parts of proteins within domains. If I want to obt…
-
I greatly appreciate you providing the full training recipes for a protein language model, however our own test on a binding prediction task showed very poor performance of embeddings obtained from AM…
-
Hello,
Thank you for developing such a great tool! I am currently doing protein screening based on the pulldown mode. We have several A100 GPU on a slurm based cluster. However, I just found the in…
-
Notice tracel-ai from burn framework, this software must substitute to high performance predictions, like robotics, predict from data lake. Some molecular pretrained models use RoBERTa as base model, …
-
Hi Zhaohan,
FusionDTI is a fantastic work. I am currently attempting to test it for drug-protein interaction prediction, but I am uncertain how to obtain the Uniprot IDs for all the protein sequen…