-
Any chance to adopt this for protein-protein interfaces?
-
Some nucleotide-protein interfaces have a very low score, like interfaces 6 and 7 of 5B1L.
I suggest to do a more thorough analysis to see if this is a common case, because here the DNA is rolled a…
-
Hi,
As searching for protein-protein interactions, my aim was to find similar interfaces in the PDB with Foldseek-multimer. I thought it would only return hits where the two similar chains are in i…
gezmi updated
5 months ago
-
https://doi.org/10.1101/137828
> Understanding the relationship between protein structure and function is a fundamental problem in protein science. Given a protein of unknown function, fast identif…
-
- [ ] Datasets
- [ ] AlphaFold 3 PDB dataset
- [x] PDB mmCIF filtering script (`scripts/filter_pdb_mmcifs.py`)
- [x] Fix periodic residue count-chemical component coun…
-
This issue contains monthly updates to the ranked list of PubMed papers for curation. The full list can be found [here](https://github.com/tanayshah2/bioregistry/blob/5560dcf284f2c0309287e0a5a551e435e…
-
I just wanted to repost the notes on what goes into a "typical protein:ligand setup pipeline" from our meeting at MolSSI on 8 Oct 2016.
---
# Contributors
* John Chodera
* Julien Michel
* Peter…
-
### Colocar um resumo ou as partes mais importante do abstract (4 linhas máx.) dos seguintes artigos:
- [ ] _P. Zhou et al., A pneumonia outbreak associated with a new coronavirus of probable bat o…
-
# ePlant3 Interactions View Blueprint and Requirements
by V. Lau (reviewed by N. Provart)
## Introduction
Genes and their gene products (proteins) can interact with other genes and gene produ…
-
Based on the contacts from @jeet-vora (#1390) plan the outreach to the DCC.
> They will also be involved in generating data descriptions that are needed for integration of data and crosslinking bet…