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Hi,
I have 3 ADAT files generated from DRAGEN DRAGEN_Protein_Quantification. I want to analyze these ADAT files together, how can I merge multiple ADAT files?
Thanks,
Junyan
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After quantification I tried simulating
IDs in expression profile:
NM_001001130.3
IDs in reference:
\>NM_001001130.3 Mus musculus zinc finger protein 85 (Zfp85), mRNA
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I am using the FragPipe software for database searches, and the output file combined_ion.tsv is used for quantification with directLFQ. I plan to perform differential expression analysis using DEqMS, …
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Hello,
I am running DIANN on an HPC and it's failing before generating all of the reports. Here is the end of the output file:
[281:53] Cross-run analysis
[281:53] Reading quantification informati…
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Hi Vadim,
I hope you're doing well. I'm encountering an issue while running DIANN on a Linux-based HPC cluster. Occasionally, the analysis crashes with the following error:
Segmentation fault (c…
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Something I noticed in our production server timeline. A user has successfully edited a sample sheet, but them clicking on "finish sheet editing" to return to browsing mode and saving a sheet version …
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Dear Vadim,
So great help in our analysis of DIA worflow!!! I have some details during my AP-MS analysis
1) If I need no-normalized quantification, could I replace "Precursor.Normalised" with "Pr…
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In the iq package, we use the following code to compare protein quantification between iq and MaxQuant?
Line1: w1
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Hi,
Thanks for providing this tool, I'm using it, and it is very fast and flexible in usage.
I wanted to ask you if you think would be possible to use it for functional annotation and quantificat…
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Maybe I missed it.
Can one use TMT quantification with metamorpheous?