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Need tutorials for general level classification and then a more detailed example for one subclass.
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Hi all,
Previously I haven't had an issue building the app, but the latest set I have is Seurat v5, which uses layers not assays. When I try to build it, get the following error:
```r
makeShin…
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Hi,
Thank you very much for this great paper and sharing all the data. I was keen to have a look at the blood snRNAseq data. I could find the lung snRNAseq data from the link provided (ma_int.rds).…
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@tsliaw: Two orthogonal questions:
## What are the right words?
- "Raw" / "Unprocessed" / "Lab data" / "Input"?
- "Derived" / "Processed" / "Processed data" / "Output"?
## What is the right s…
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Thank you for this great tool. I am trialing to determine whether we can pool cell-lines for 10X runs and deconvolute using variants. To test I have a xenograft snRNAseq run (10X v3) that is from a si…
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Hi @Wei-BioMath ,
I've been following the tutorial but with my own data, but then ran into problems with the netVisual_circle_neuron function when trying to plot a specific interaction pair.
Her…
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Hello, Thank you for providing such a fantastic tool. I have a question.I now have a mixed single-cell sample consisting of four female mice and four male mice. I attempted to split it into eight samp…
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Human 10X snRNA-seq support.
*Why?* Initially the interest in snRNAseq came from the need to be able to process large cells (i.e. cancer) or oddly shaped cells (i.e. brain neurons) that would not pro…
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Hello
I reproduce your research for my study of snATACseq & snRNAseq.
I downloaded all of your metadata in GEO and Synapse database, but I can't find the file included peak_region_fragments vari…
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Could you please give me a link to download 30 full size images or at least high resolution?
Thanks a lot! I cant connect to globus.