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### Discussed in https://github.com/MannLabs/alphadia/discussions/375
Originally posted by **rednaSander** November 15, 2024
Hi,
Issue:
The software crashes when attempting to load a .spe…
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Read library spectra from various library formats:
- [X] Full SpectraST support (sptxt).
- [X] Mascot Generic support (MGF).
- [ ] BiblioSpec support (blib). See #2.
- [ ] Encyclopedia support …
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When trying to read in the output of spectronaut_report file, the column called "FG.ApexIonMobility" is not being imported with the rest of the data (the column seems to be dropped). Trying out the fo…
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Hello,
When using the Fragpipe, I have a problem with the modification setting. How to set a modification not C-term, like this in Spectronaut?
![Capture](https://github.com/user-attachments/asset…
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Dear DIA-NN,
Thanks for developing such a wonderful software! Your work is highly appreciated!
I have a question:
Would it be possible to customize a modification and insert its delta mass (L…
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Ran library free mode in Spectronaut
![image](https://user-images.githubusercontent.com/21457/213505644-ba6600f4-7ff0-411e-b72a-974280f8dd39.png)
parameter [20230119_161636_Slot1-54_Report.setup.txt…
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Median_abs_epsilon is calculated here:
https://github.com/Proteobench/ProteoBench/blob/8ed5b5ad9588b5b8b10c3b0cfd9ec284be43a59a/proteobench/datapoint/quant_datapoint.py#L124-L127
So is actually…
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Hi,
Thanks for your good job .And I intend to predict a library by deepDIA method.And I have run the test code and get a predicted library with a size of 350449kb.And I try to import it to the DIANN,…
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Hi,
I have encountered trouble in uploading the Spectronaut result. I have included the PEP.MS2Quantity in my result but PhosMap keeps saying that the PEP.MS2Quantity data is missing. Can I contact…
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Hi, Vadim
I recently want to test DIA-NN function of phosphosite localization. I downloaded the raw MS data which included 166 synthetic phosphopeptides spiked in yeast lysate and the spectral libr…