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AllenCellModeling
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pytorch_integrated_cell
Integrated Cell project implemented in pytorch
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Bump scipy from 1.1.0 to 1.10.0
#102
dependabot[bot]
opened
1 year ago
0
Bump torch from 1.2.0 to 1.13.1
#101
dependabot[bot]
opened
1 year ago
0
Bump pillow from 5.2.0 to 9.3.0
#100
dependabot[bot]
opened
1 year ago
0
No matching distribution for lkaccess
#99
antoineruzette
opened
2 years ago
0
Bump pillow from 5.2.0 to 9.0.1
#98
dependabot[bot]
closed
1 year ago
1
Bump pillow from 5.2.0 to 9.0.0
#97
dependabot[bot]
closed
2 years ago
1
Bump pillow from 5.2.0 to 8.3.2
#96
dependabot[bot]
closed
2 years ago
1
inplace operation Runtime Failure
#95
JPFrancis
opened
3 years ago
0
Bump pillow from 5.2.0 to 8.2.0
#94
dependabot[bot]
closed
3 years ago
1
Bump pillow from 5.2.0 to 8.1.1
#93
dependabot[bot]
closed
3 years ago
1
merge actk dp etc into master
#92
donovanr
opened
3 years ago
0
Serotiny workflow integration: Reimplement some of the notebooks in serotiny
#91
ritvikvasan
closed
2 years ago
1
New results: Analyze latent space of the segmentation models for the variance, and mito datasets
#90
ritvikvasan
opened
3 years ago
0
Documentation: Args file and its contents
#89
ritvikvasan
opened
3 years ago
0
Notebook example: Pass a single image through a trained model (ref and structure), get latent vector, generate structure
#88
ritvikvasan
opened
3 years ago
0
Notebook example: Generate multiple structures from a trained model into a single cell shape
#87
ritvikvasan
opened
3 years ago
0
Notebook example: Explore latent space of a trained model
#86
ritvikvasan
opened
3 years ago
0
Notebook example: Train a 2D, 3D model on any dataset from scratch
#85
ritvikvasan
opened
3 years ago
0
Ref segmentations
#84
donovanr
opened
3 years ago
0
fix model diagram image
#83
donovanr
opened
3 years ago
0
PlosCompBiol submission guidelines
#82
tknijnen
opened
4 years ago
0
logistics: Add authors to manuscript
#81
donovanr
closed
4 years ago
0
logistics: clean up manuscript to get started again
#80
donovanr
closed
4 years ago
0
Discussion: vanilla is ok
#79
donovanr
closed
4 years ago
3
Discussion: latent space orthogonality / reproducibility
#78
donovanr
opened
4 years ago
0
Discussion: Loss function
#77
donovanr
closed
4 years ago
2
Discussion: β-VAE vs GAN
#76
donovanr
opened
4 years ago
1
Results: Content related to Fig. 5
#75
donovanr
opened
4 years ago
1
Results: Figure 5
#74
donovanr
opened
4 years ago
2
Results: Content related to Fig. 4b
#73
donovanr
opened
4 years ago
0
Results: Content related to Fig. 4
#72
donovanr
opened
4 years ago
0
Results: Figure 4
#71
donovanr
opened
4 years ago
0
Results: latent space truncation
#70
donovanr
opened
4 years ago
0
Results: interpretation of the latent space dimensions
#69
donovanr
opened
4 years ago
0
Results: reconstruction vs. compactness -- KL vs. dim plot
#68
donovanr
opened
4 years ago
0
Results: Content related to Fig. 3
#67
donovanr
opened
4 years ago
1
Results: Figure 3
#66
donovanr
opened
4 years ago
1
Results: talk up good organelle distributions
#65
donovanr
opened
4 years ago
0
Results: Content related to Fig. 2
#64
donovanr
closed
4 years ago
0
Results: Figure 2
#63
donovanr
opened
4 years ago
1
Results: Table 1
#62
donovanr
closed
4 years ago
1
Results: Figure 1
#61
donovanr
opened
4 years ago
1
Intro: Finesse raw vs segmented images
#60
donovanr
closed
4 years ago
1
Intro: contribution specificity
#59
donovanr
closed
4 years ago
0
Intro: citations
#58
donovanr
closed
4 years ago
0
Add contributing agreement markdown from AI
#57
Kimcmetzler
closed
4 years ago
1
Code: Error during 'pip install'
#56
Calebium
opened
4 years ago
1
Pape
#55
gregjohnso
closed
4 years ago
1
Pape
#54
gregjohnso
closed
4 years ago
1
Pape
#53
gregjohnso
closed
4 years ago
0
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