Bioconductor bioc_docker issues

Bioconductor / bioc_docker

[DEPRECATED] Docker containers for Bioconductor

https://github.com/bioconductor/bioconductor_docker

Artistic License 2.0

49 stars 26 forks source link

issues

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Bump json from 1.8.1 to 2.3.1

#98 dependabot[bot] opened 4 years ago
0
inconsistent tag names

#97 nsheff closed 4 years ago
1
Failed attempt to run docker for deseq2

#96 claudiadast closed 4 years ago
1
Bioc user issue

#95 nturaga closed 4 years ago
0
Bump excon from 0.42.1 to 0.71.0

#94 dependabot[bot] opened 4 years ago
0
Can't use R_LIBS_USER because they are overridden in .Renviron

#93 nsheff closed 4 years ago
5
Add libmariadb-dev instead of libmariadb-dev-compat

#92 nturaga closed 5 years ago
0
bioconductor/devel_base2:latest image -- libssl1.0.2 issue

#91 nturaga closed 5 years ago
7
release_proteomics and devel_proteomics docker fail - Deprecate docker?

#90 lshep opened 5 years ago
1
Optimize src

#89 nturaga closed 5 years ago
8
Optimize src directory

#88 nturaga closed 5 years ago
0
Fix/update readme r36

#87 sneumann closed 5 years ago
2
proteomics: Rchemcpp fails due to staged install

#86 sneumann closed 5 years ago
2
Update release tag and fix R version in config.yml

#85 sneumann closed 5 years ago
4
Update for Release 3.9

#84 sneumann opened 5 years ago
1
Move R-devel version hack from core/Dockerfile.in to base/Dockerfile.in

#83 sneumann closed 5 years ago
1
Explicitly set OpenBabel environment variables, closing #81

#82 sneumann closed 5 years ago
0
devel_mscore2: ChemminerOB fails to build

#81 sneumann closed 5 years ago
0
devel_mscore2: proFIA fails to byte-compile and prepare package for lazy loading

#80 sneumann closed 5 years ago
2
devel_mscore2: BiocVersion not available for R-devel

#79 sneumann closed 5 years ago
7
devel_mscore2: ChemmineR half-failure

#78 sneumann closed 5 years ago
0
Disable BiGGR, closes #76

#77 sneumann closed 5 years ago
2
devel_metabolomics2 fails due to BiGGR

#76 sneumann closed 5 years ago
1
Add docker hub / docker cloud build badges

#75 sneumann closed 5 years ago
1
Add system dependencies for package sf. Closes #71

#74 sneumann closed 5 years ago
0
remove spliceSites from build. Closes #55

#73 sneumann closed 5 years ago
0
Add dockerhub build badges

#72 sneumann closed 5 years ago
4
release metabolomics fails - R 3.5.3 Bioc 3.8

#71 lshep closed 5 years ago
2
add cytometry Container

#70 mikejiang closed 5 years ago
4
add new cytometry container

#69 mikejiang closed 5 years ago
8
Bug fix: .Rprofile needs to be in/home/rstudio, not in root.

#68 nturaga closed 5 years ago
1
devel_metabolomics2 cancelled for timeout

#67 lshep closed 5 years ago
0
install libpng-dev

#66 lwaldron closed 5 years ago
3
Mounted volume for site library

#65 lwaldron closed 5 years ago
7
Balancing build time for mscore and protmetcore

#64 sneumann closed 5 years ago
2
release_protmetcore

#63 lshep closed 5 years ago
1
devel_mscore2

#62 lshep closed 6 years ago
0
devel_proteomics build cancelled due to timeout

#61 sneumann closed 5 years ago
7
devel_proteomics: disable prot2D

#60 sneumann closed 6 years ago
0
devel_proteomics: installing only 50 packages

#59 sneumann closed 6 years ago
0
devel_metabolomics: disable mQTL.NMR

#58 sneumann closed 6 years ago
1
devel_protmetcore2 not building/pushing

#57 sneumann closed 6 years ago
2
mzR not installing in devel_mscore2:

#56 sneumann closed 6 years ago
2
release_proteomics

#55 lshep closed 5 years ago
2
release_metabolomics

#54 lshep closed 5 years ago
0
Use BiocManager

#53 lwaldron closed 6 years ago
1
base image should disable download progress bar

#52 sneumann opened 6 years ago
1
devel_metabolomics2 exceeds build time on docker hub

#51 sneumann closed 6 years ago
1
ddalpha is victim of OOM killer

#50 sneumann closed 6 years ago
3
change logs

#49 Drwhit closed 6 years ago
1