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BjornFJohansson
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pydna
Clone with Python! Data structures for double stranded DNA & simulation of homologous recombination, Gibson assembly, cut & paste cloning.
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Type hinting
#176
manulera
opened
10 months ago
2
Bump biopython from 1.81 to 1.83
#175
dependabot[bot]
closed
10 months ago
1
Bump jinja2 from 3.1.2 to 3.1.3
#174
dependabot[bot]
closed
10 months ago
2
Bump pillow from 10.1.0 to 10.2.0
#173
dependabot[bot]
closed
10 months ago
2
Bump pytest from 7.4.3 to 7.4.4
#172
dependabot[bot]
closed
10 months ago
2
Bump coverage from 7.3.2 to 7.4.0
#171
dependabot[bot]
closed
10 months ago
2
Bump coverage from 7.3.2 to 7.3.4
#170
dependabot[bot]
closed
10 months ago
2
Bump biopython from 1.81 to 1.82
#169
dependabot[bot]
closed
10 months ago
1
Bump coverage from 7.3.2 to 7.3.3
#168
dependabot[bot]
closed
11 months ago
2
Bump pytest-doctestplus from 1.0.0 to 1.1.0
#167
dependabot[bot]
closed
10 months ago
2
Unexpected products from assemblies?
#166
manulera
opened
11 months ago
4
Alternative assembly implementation
#165
manulera
opened
11 months ago
3
Bump sphinx-rtd-theme from 1.3.0 to 2.0.0
#164
dependabot[bot]
closed
11 months ago
1
Issue 157
#163
manulera
closed
11 months ago
1
Should numbers greater than len raise errors in __get_item__?
#162
manulera
opened
12 months ago
2
Different behaviour of __getitem__ in Dseqrecord and Dseq
#161
manulera
closed
9 months ago
2
Feature error in Dseqrecord::__getitem__ when slicing circular molecules
#160
manulera
closed
9 months ago
2
Delete stale branches?
#159
manulera
closed
9 months ago
3
Support for ligation of partially overlapping overhangs?
#158
manulera
opened
1 year ago
4
Separating detection of cutsites from cutting
#157
manulera
closed
9 months ago
1
Bump matplotlib from 3.7.3 to 3.7.4
#156
dependabot[bot]
closed
1 year ago
0
closes #154
#155
manulera
closed
1 year ago
1
Running sphinx documentation locally
#154
manulera
closed
1 year ago
1
what is pos in Dseq?
#153
manulera
closed
1 year ago
2
Using poetry dependencies in github actions
#152
manulera
closed
10 months ago
8
Include overhang information in GenBank files
#151
manulera
opened
1 year ago
1
Issue 147
#150
manulera
closed
1 year ago
2
Should molecules with overhangs be allowed to be circular?
#149
manulera
closed
1 month ago
2
Bump pydivsufsort from 0.0.11 to 0.0.12
#148
dependabot[bot]
closed
1 year ago
2
Instantiate Dseq from full sequence and left and right overhangs
#147
manulera
closed
1 year ago
2
Bump pytest from 7.4.2 to 7.4.3
#146
dependabot[bot]
closed
1 year ago
1
Bump urllib3 from 2.0.2 to 2.0.7
#145
dependabot[bot]
closed
1 year ago
2
Bump coverage from 7.3.0 to 7.3.2
#144
dependabot[bot]
closed
1 year ago
2
Bump pillow from 9.5.0 to 10.0.1
#143
dependabot[bot]
closed
1 year ago
2
Bump urllib3 from 2.0.2 to 2.0.6
#142
dependabot[bot]
closed
1 year ago
2
Bump prettytable from 3.7.0 to 3.9.0
#141
dependabot[bot]
closed
1 year ago
2
Bump coverage from 7.3.0 to 7.3.1
#140
dependabot[bot]
closed
1 year ago
1
Bump pytest from 7.4.0 to 7.4.2
#139
dependabot[bot]
closed
1 year ago
1
Bump pyfiglet from 0.8.post1 to 1.0.0
#138
dependabot[bot]
closed
1 year ago
1
Bump pytest from 7.4.0 to 7.4.1
#137
dependabot[bot]
closed
1 year ago
2
Linear assembly producing misannotated sequences
#136
JamesBagley
opened
1 year ago
3
Bump pytest-doctestplus from 0.12.1 to 1.0.0
#135
dependabot[bot]
closed
1 year ago
1
Bump coverage from 7.2.7 to 7.3.0
#134
dependabot[bot]
closed
1 year ago
1
Infinite loop
#133
jefe-jeff
closed
1 year ago
3
Adding the vector to insert duplicated the digestion enzyme
#132
LuisaFJimenez
closed
2 months ago
1
Bump matplotlib from 3.7.1 to 3.7.2
#131
dependabot[bot]
closed
1 year ago
1
Bump pillow from 9.5.0 to 10.0.0
#130
dependabot[bot]
closed
1 year ago
1
Bump pytest from 7.3.1 to 7.4.0
#129
dependabot[bot]
closed
1 year ago
1
Bump pyparsing from 3.0.9 to 3.1.0
#128
dependabot[bot]
closed
1 year ago
2
Bump pytest-doctestplus from 0.12.1 to 0.13.0
#127
dependabot[bot]
closed
1 year ago
1
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