issues
search
Clinical-Genomics
/
scout
VCF visualization interface
https://clinical-genomics.github.io/scout
BSD 3-Clause "New" or "Revised" License
150
stars
46
forks
source link
issues
Newest
Newest
Most commented
Recently updated
Oldest
Least commented
Least recently updated
PDF export of general report does not (always?) show inheritance patterns for OMIM terms
#4897
dnil
opened
12 minutes ago
0
In silicon prediction tools to bioinformatics pipelines and Scout
#4896
fulyataylan
opened
4 hours ago
4
General report does not generate on missing STR source
#4895
dnil
opened
8 hours ago
0
Report overview link on case
#4893
Jakob37
opened
3 days ago
4
Exon level coverage information
#4894
Jakob37
opened
3 days ago
3
Allow setting prioritised status on case load
#4892
dnil
opened
5 days ago
0
Advanced search on dashboard
#4891
dnil
opened
5 days ago
0
Chanjo2 report available for cases without gene panels
#4890
northwestwitch
closed
5 days ago
3
Fix #4888 - add RNA delivery report
#4889
dnil
closed
5 days ago
5
RNA delivery report
#4888
dnil
closed
5 days ago
0
Fix search similar cases
#4887
northwestwitch
closed
6 days ago
2
More LRS SV callers
#4886
dnil
opened
1 week ago
4
Fix #4884 - enable Gens balsamic button
#4885
dnil
closed
6 days ago
6
GENS button for TGA samples
#4884
mathiasbio
closed
6 days ago
0
More long-read caller tags
#4883
fellen31
opened
1 week ago
5
Inheritance models on variantS page not correctly displayed
#4882
dnil
closed
1 week ago
25
Subject id search
#4881
dnil
closed
1 week ago
5
Preselect ClinVar ACMG criteria according to the variant's ACMG classification
#4880
northwestwitch
closed
1 week ago
4
Feedback on integration of other cancer knowledgebases in Scout for cancer
#4879
muabnezor
opened
1 week ago
8
Search subject ID from case list
#4878
eliottBo
closed
1 week ago
3
Ribbon/SplitThreader integration
#4877
dnil
opened
1 week ago
1
Rename 'Comment on clinical significance' to 'Comment on classification' in ClinVar multistep form
#4876
northwestwitch
closed
1 week ago
3
Fix delete icons on ClinVar submissions page
#4875
northwestwitch
closed
1 week ago
2
ACMG classification on ClinVar form to reflect the classification of the variant
#4874
northwestwitch
closed
1 week ago
3
Rename ClinVar submission field so it has the same name in two places
#4873
northwestwitch
closed
1 week ago
2
Python 3.8 EOL (October 2024)
#4872
northwestwitch
opened
1 week ago
0
Update igv.js chrom alias files to include alias for chrom M
#4871
northwestwitch
closed
1 week ago
4
Ugly buttons in the ClinVar submission objects
#4870
northwestwitch
closed
1 week ago
1
remove clinsig_comment (Comment on clinical significance) from the ClinVar form
#4869
northwestwitch
closed
1 week ago
5
Update in ClinVar json submission schema probably responsible for failing submissions
#4868
northwestwitch
closed
1 week ago
4
Version 4.89
#4867
dnil
closed
3 days ago
6
No reads shown for MT variants in internal IGV
#4866
Jakob37
closed
1 week ago
28
Fix alamut link error
#4865
northwestwitch
closed
1 week ago
3
Error loading case general report
#4864
northwestwitch
closed
1 week ago
1
Fix #4862 - ORPHA inheritance patterns hidden
#4863
dnil
closed
1 week ago
6
Do not use ORPHA inheritance pattern on genes
#4862
dnil
closed
1 week ago
0
SMN alignment view buttons
#4861
dnil
opened
1 week ago
0
Coverage report alchemy issue?
#4860
dnil
closed
1 week ago
3
Fix string pattern warnings
#4859
dnil
closed
1 week ago
4
docker-compose up fails when users activity logging is on
#4858
northwestwitch
closed
2 weeks ago
2
refactor app logging
#4857
northwestwitch
closed
1 week ago
11
Igv locus make fix
#4856
dnil
closed
1 week ago
2
possible compound, how many are shown?
#4855
4WGH
closed
2 weeks ago
2
Fix #4847 - retired SPANR link
#4854
dnil
closed
2 weeks ago
3
Attempt to fix #4852 by explicitly loading variants
#4853
dnil
closed
2 weeks ago
15
Omics variants view test coverage unexpectedly low?
#4852
dnil
closed
2 weeks ago
0
Possibly invalid string escapes?
#4851
dnil
closed
1 week ago
1
Populate MT report with stats from d4 files
#4850
northwestwitch
closed
2 weeks ago
4
Log module is present but not used
#4849
northwestwitch
closed
1 week ago
0
Scout user meeting, tentatively 241106 9.00
#4848
dnil
opened
2 weeks ago
0
Next