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Clinical-Genomics
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scout
VCF visualization interface
https://clinical-genomics.github.io/scout
BSD 3-Clause "New" or "Revised" License
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Subject id search
#4881
dnil
closed
1 month ago
5
Preselect ClinVar ACMG criteria according to the variant's ACMG classification
#4880
northwestwitch
closed
1 month ago
4
Feedback on integration of other cancer knowledgebases in Scout for cancer
#4879
muabnezor
opened
1 month ago
8
Search subject ID from case list
#4878
eliottBo
closed
1 month ago
3
Ribbon/SplitThreader integration
#4877
dnil
opened
2 months ago
1
Rename 'Comment on clinical significance' to 'Comment on classification' in ClinVar multistep form
#4876
northwestwitch
closed
1 month ago
3
Fix delete icons on ClinVar submissions page
#4875
northwestwitch
closed
1 month ago
2
ACMG classification on ClinVar form to reflect the classification of the variant
#4874
northwestwitch
closed
1 month ago
3
Rename ClinVar submission field so it has the same name in two places
#4873
northwestwitch
closed
1 month ago
2
Python 3.8 EOL (October 2024)
#4872
northwestwitch
opened
2 months ago
3
Update igv.js chrom alias files to include alias for chrom M
#4871
northwestwitch
closed
2 months ago
4
Ugly buttons in the ClinVar submission objects
#4870
northwestwitch
closed
1 month ago
1
remove clinsig_comment (Comment on clinical significance) from the ClinVar form
#4869
northwestwitch
closed
2 months ago
5
Update in ClinVar json submission schema probably responsible for failing submissions
#4868
northwestwitch
closed
2 months ago
4
Version 4.89
#4867
dnil
closed
1 month ago
6
No reads shown for MT variants in internal IGV
#4866
Jakob37
closed
2 months ago
28
Fix alamut link error
#4865
northwestwitch
closed
2 months ago
3
Error loading case general report
#4864
northwestwitch
closed
2 months ago
1
Fix #4862 - ORPHA inheritance patterns hidden
#4863
dnil
closed
2 months ago
6
Do not use ORPHA inheritance pattern on genes
#4862
dnil
closed
2 months ago
0
SMN alignment view buttons
#4861
dnil
closed
1 month ago
0
Coverage report alchemy issue?
#4860
dnil
closed
2 months ago
3
Fix string pattern warnings
#4859
dnil
closed
2 months ago
4
docker-compose up fails when users activity logging is on
#4858
northwestwitch
closed
2 months ago
2
refactor app logging
#4857
northwestwitch
closed
2 months ago
11
Igv locus make fix
#4856
dnil
closed
2 months ago
2
possible compound, how many are shown?
#4855
4WGH
closed
2 months ago
2
Fix #4847 - retired SPANR link
#4854
dnil
closed
2 months ago
3
Attempt to fix #4852 by explicitly loading variants
#4853
dnil
closed
2 months ago
15
Omics variants view test coverage unexpectedly low?
#4852
dnil
closed
2 months ago
0
Possibly invalid string escapes?
#4851
dnil
closed
2 months ago
1
Populate MT report with stats from d4 files
#4850
northwestwitch
closed
2 months ago
4
Log module is present but not used
#4849
northwestwitch
closed
2 months ago
0
Scout user meeting, 24-11-06 9.00
#4848
dnil
closed
1 week ago
5
SPANR not responding?
#4847
dnil
closed
2 months ago
1
Remove a duplicated panel version history list
#4846
dnil
closed
2 months ago
4
Move the code to collect MT copy number stats for MT report to the chanjo extension
#4845
northwestwitch
closed
2 months ago
2
Include both creation and last modification dates in gene panels pages
#4844
northwestwitch
closed
2 months ago
4
Fix regular expression check in new panel form
#4843
northwestwitch
closed
2 months ago
2
Variant searches hangs indefinitely
#4842
Jakob37
closed
2 months ago
20
Avoid open login redirect attacks via next
#4841
northwestwitch
closed
2 months ago
3
Version date for removed gene panel
#4840
dnil
closed
2 months ago
4
Search by similar case might not work as intended
#4839
northwestwitch
closed
1 month ago
2
Fix broken heading anchors pointing to admin login markdown page
#4838
northwestwitch
closed
2 months ago
3
Missing anchors when running mkdocs
#4837
northwestwitch
closed
2 months ago
0
Create MT reports using chanjo2
#4836
northwestwitch
closed
2 months ago
0
Use WTS outlier region to create IGV locus if it is available
#4835
dnil
closed
2 months ago
0
Import / rewrite docs from CG Atlas
#4834
dnil
opened
2 months ago
0
Handling of panels in default search
#4833
Jakob37
opened
2 months ago
0
SMN search buttons on SMN CN page
#4832
Jakob37
closed
2 months ago
6
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