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Clinical-Genomics
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scout
VCF visualization interface
https://clinical-genomics.github.io/scout
BSD 3-Clause "New" or "Revised" License
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Patch release 4.88.1
#4831
northwestwitch
closed
2 months ago
4
A bit more advanced users' activity logging
#4830
northwestwitch
closed
2 months ago
14
Patch IGV.js to v3.0.5
#4829
dnil
closed
2 months ago
3
IGV 3.0.5
#4828
dnil
closed
2 months ago
1
MIssing cases
#4827
sofievonlanthen
closed
2 months ago
13
Display WTS outliers again
#4826
northwestwitch
closed
2 months ago
12
GT check excludes all variants from the WTS outliers page
#4825
northwestwitch
closed
2 months ago
0
Minor release 4.88
#4824
northwestwitch
closed
2 months ago
5
Compound top 20 does not show correct order, and shows "not loaded"
#4823
Jakob37
closed
2 months ago
21
Show SNV/indels in SMN genes via button redirect from the SMN CN page
#4822
Jakob37
closed
2 months ago
8
SMN CN page comment field for variant instead of using full case comment field
#4821
Jakob37
opened
2 months ago
1
SMN CN page pin button
#4820
Jakob37
opened
2 months ago
3
test revert igv.js to v2
#4819
northwestwitch
closed
2 months ago
7
IGV hangs while loading sample tracks
#4818
northwestwitch
closed
2 months ago
4
Refactor RNA handling
#4816
dnil
closed
2 months ago
0
Fix #4814 - actually use variant sample in displaying omics variants
#4815
dnil
closed
2 months ago
9
Individual with omics variants arbitrarily set as first individual of the case
#4814
northwestwitch
closed
2 months ago
0
Patch version 4.87.2
#4813
northwestwitch
closed
2 months ago
3
Show CoLoRSdb freq in Pop Freq cell on variantS page
#4812
northwestwitch
closed
2 months ago
3
Fix coverage upload
#4811
northwestwitch
closed
2 months ago
2
design principles, extensions
#4810
parlar
closed
2 months ago
4
Upload coverage step in GitHub actions seems broken
#4809
northwestwitch
closed
2 months ago
6
Selective case update
#4808
dnil
opened
2 months ago
0
Invalid tag names in VCF: prod & demo
#4807
dnil
opened
2 months ago
0
Fix setup database command
#4806
northwestwitch
closed
2 months ago
4
Partially fix #4802 - update demo VCF header with missing keys
#4803
dnil
closed
2 months ago
6
setup problems, hgnc_genes
#4802
parlar
closed
2 months ago
7
Rename camel case columns
#4801
dnil
closed
2 months ago
7
DROP TSV header - a few more headings camel case
#4800
dnil
closed
2 months ago
0
Update case omics files
#4799
dnil
closed
2 months ago
8
third-party interpretation tool integration
#4798
parlar
closed
2 months ago
7
Update case command options for omics_files
#4797
dnil
closed
2 months ago
0
WTS outlier genes flagged on SNV-SV-variantS view
#4796
dnil
opened
2 months ago
0
Colorsdb on variantS pop freq tooltip?
#4794
dnil
closed
2 months ago
0
Patch 4.87.1 - fix genes cell on variantS page
#4793
northwestwitch
closed
2 months ago
3
Ugliness on variantS list: multiple gene names get squished together, and overflow to nearby column
#4792
dnil
closed
2 months ago
8
Fix #4790 - trailing comma
#4791
dnil
closed
2 months ago
2
js array issue on splice junction track view (release candidate bug)
#4790
dnil
closed
2 months ago
0
Coloring alignments by base modification removes read grouping
#4789
fellen31
closed
3 weeks ago
11
Show genes track also when RNA alignments are present without splice junctions tracks
#4788
northwestwitch
closed
2 months ago
2
Unscrollable splice junctions track
#4787
northwestwitch
closed
2 months ago
6
Update igv.js to 3.0.4.
#4786
dnil
closed
2 months ago
3
Version 4.87 - configure RNA build, add igv.js genome aliases
#4785
dnil
closed
2 months ago
11
Fix #4782 - explicit igv.js chr alias option
#4784
dnil
closed
2 months ago
2
Fix #4782 - IGV does not remove chr str from non-autosomes
#4783
dnil
closed
2 months ago
8
Issues to access IGV from variant page
#4782
sofievonlanthen
closed
2 months ago
4
Fix #4780 - RNA aln genome build tooltips
#4781
dnil
closed
2 months ago
3
Change only in hg38 RNA tooltip
#4780
dnil
closed
2 months ago
0
Fix style of SNVs and SVs buttons on WTS Outliers page
#4779
northwestwitch
closed
2 months ago
2
Patch release v.4.86.1
#4778
northwestwitch
closed
2 months ago
3
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