CoBrALab qbatch issues - Githubissues

CoBrALab / qbatch

The Unlicense

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Add github testing actions

#222 gdevenyi opened 1 year ago
0
List comprehension to drop lines starting with comment

#221 gdevenyi opened 1 year ago
0
remove unused vars

#220 joshunrau closed 1 year ago
1
Ignore comment lines in job files

#219 gdevenyi opened 1 year ago
0
Add option to control SCRIPT_FOLDER

#218 gdevenyi opened 2 years ago
0
Make --system local a bit more usable

#217 gdevenyi opened 2 years ago
0
Add a date/timestamp to default job name if not provided

#216 gdevenyi opened 2 years ago
0
Enable use of None for memory to account for slurm's 0 for whole-node memory

#215 gdevenyi closed 2 years ago
0
Improve parallel call to avoid empty logfiles

#214 gdevenyi closed 2 years ago
0
Added --block option for blocking job submission

#213 Gab-D-G closed 3 years ago
2
Cannot set multiple default scheduler options via `QBATCH_OPTIONS`

#212 mjclarke94 closed 3 years ago
3
Fix task_list referenced before assigned error

#211 cfhammill closed 3 years ago
1
Fix some missing UTF-8 handling for text in script file

#210 gdevenyi closed 4 years ago
0
Handle walltime units uniformly.

#209 gdevenyi opened 4 years ago
1
Non-ASCII characters in a filename

#208 Marina-Blmz closed 4 years ago
1
Merge v2.2

#207 gdevenyi closed 4 years ago
2
V2.2

#206 gdevenyi closed 4 years ago
0
Implement container wrapper mode for docker/singularity

#205 gdevenyi closed 4 years ago
0
[WIP] Container wrapper mode

#204 gdevenyi closed 4 years ago
0
Add a CITATION file to make it clear how to cite this project

#203 pipitone closed 4 years ago
1
Add --prefix-commands option

#202 gdevenyi opened 4 years ago
0
Way to use qbatch efficently on pbs torque ?

#201 rajiv03 closed 4 years ago
2
remove --compress and add --keep-order to parallel call

#200 gdevenyi closed 2 years ago
1
Rename THREADS_PER_COMMAND to QBATCH_THREADS_PER_COMMAND and also export OMP_NUM_THREADS

#199 gdevenyi opened 4 years ago
2
Adjust THREADS_PER_COMMAND for underpacked jobs

#198 gdevenyi opened 4 years ago
0
Fix naming of logfile for non array slurm jobs

#197 gdevenyi closed 4 years ago
0
Older SLURM used --workdir instead of --chdir

#196 gdevenyi closed 4 years ago
2
Fix slurm_find_jobs returning a list when no jobs found

#195 gdevenyi closed 5 years ago
0
slurm_find_jobs incorrect return on empty joblist

#194 gdevenyi closed 5 years ago
0
Update more unicode python2 things

#193 gdevenyi closed 5 years ago
0
Enable use of None for memory to account for slurm's 0 for whole-node memory

#192 gdevenyi closed 4 years ago
1
Enable use of None for memory to account for slurm's 0 for whole-node memory

#191 gdevenyi closed 5 years ago
0
Tweak chunk size to allow for unlimited size jobs

#190 gdevenyi closed 4 years ago
1
Fix SLURM dependency embedding having an errant quote

#189 gdevenyi closed 5 years ago
0
Cleanup missing command checks

#188 gdevenyi closed 5 years ago
0
Explicitly embed the launch shell in PBS and SGE commands

#187 gdevenyi closed 5 years ago
0
Fix slurm squeue listing

#186 gdevenyi closed 5 years ago
0
Fix submission breakage with a single job

#185 cfhammill closed 5 years ago
1
Update travis to xenial, remove python 3.3 support, add pypy

#184 gdevenyi closed 5 years ago
0
Tell travis to only deploy once

#183 gdevenyi closed 5 years ago
0
Add travis to pypi deployment

#182 gdevenyi closed 5 years ago
0
Add install depends, bump version number

#181 gdevenyi closed 5 years ago
1
Checks presence of queue binary before submitting jobs

#180 gdevenyi closed 5 years ago
0
setup.py needs to list dependencies properly

#179 pipitone closed 5 years ago
3
Improve module documentation and commenting

#178 pipitone opened 5 years ago
0
Environment can break --help

#177 bcdarwin closed 5 years ago
2
Position of '-' argument matters

#176 bcdarwin closed 5 years ago
2
Selectively name job logs for slurm based on individual or array

#175 gdevenyi closed 5 years ago
0
Embed full qbatch command into jobfile

#174 gdevenyi opened 5 years ago
0
Embed threads per command in local runjob

#173 gdevenyi closed 5 years ago
0