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DReichLab
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EIG
Eigen tools by Nick Patterson and Alkes Price lab
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Query about renaming first column of IND file
#107
zhreyaz
opened
4 weeks ago
1
elliptical confidence not calculated
#106
Kelzor
opened
2 months ago
3
convertf exporting to PACKEDPED
#105
zmaroti
opened
3 months ago
0
numsnps output:0
#104
zhreyaz
opened
4 months ago
1
Unable to allocate units
#103
dp-0102
closed
5 months ago
1
FST details (by SNP FST) not printed
#102
TaniaPGue
opened
6 months ago
4
(getpedgenos) all.filter.ped bad geno *
#101
zishanw
opened
6 months ago
1
SNPweights: ZeroDivisionError: float division by zero
#100
alexisregelson
closed
7 months ago
0
Can smartpca output fst value for each SNP?
#99
minglibio
closed
8 months ago
2
Output Files Not Being Made
#98
dogcow4958
closed
9 months ago
2
Fix build for OSX-arm64
#97
tschuelia
opened
11 months ago
2
Questions regarding multithreading
#96
freshspaceoctopus
opened
11 months ago
0
zz1 lines in logfile and run taking a very long time
#95
jaurbanChicago
opened
11 months ago
0
Convertf deleting population names
#94
dp-0102
closed
1 year ago
1
fatalx: OOPS number of individuals 16388 != 16389 in input files Aborted (core dumped)
#93
dp-0102
closed
1 year ago
0
obsolete finite function
#92
MatthewMah
opened
1 year ago
0
XOR in snpsortit() of mcio.c
#91
ntakebay
opened
1 year ago
0
Improved user CLI interface
#90
bredeson
opened
1 year ago
0
There is no "convertf" in the bin folder.
#89
ZhenyaoYe
closed
1 year ago
4
bad chrom: 100
#88
cfz1998
opened
1 year ago
2
Smartpca memory error
#87
LucasP78
opened
1 year ago
2
Issue when converting from plink to eigenstrat using convertf
#86
jaurbanChicago
opened
1 year ago
4
ld: symbol(s) not found for architecture x86_64: issue
#85
hyunnnie
closed
1 year ago
2
.snp file format
#84
Liuyh275
opened
1 year ago
1
smartpca eigen vector file missing individuals
#83
victor-canta
opened
1 year ago
3
release version 8.0
#82
jowodo
closed
1 year ago
1
Error while working with Eigensoft command smartpca command
#81
sharmavarun840
opened
2 years ago
1
Unable to make bed *and* map for convertf
#80
hhg7
opened
2 years ago
0
Glibc specific version preventing smartpca from working
#79
hhg7
closed
2 years ago
1
all samples being ignored by convertf
#78
hhg7
closed
2 years ago
4
Error during make in Ubuntu
#77
curiosusJR
closed
2 weeks ago
1
Segmentation fault with 1000G but not with HM3
#76
swvanderlaan
opened
2 years ago
2
Error with smarteigenstrat.perl accepting pca output from smartpca.perl
#75
harrsha4
opened
2 years ago
1
(getpedgenos) bad geno <DEL>
#74
Zymaniswenzai
opened
2 years ago
1
genotype file bad line
#73
DcornishUCL
closed
2 years ago
2
Illegal instruction
#72
bamorim-bio
opened
2 years ago
4
maxpop 1000
#71
catheriz
opened
2 years ago
1
conda - smartpca stalling issue
#70
williammarsh
opened
3 years ago
5
Error in "make" without any reminder.
#69
JFF1594032292
closed
3 years ago
2
XTX has zero trace (perhaps no data)
#68
sahwa
closed
3 years ago
2
make install hangs on dependencies already installed
#67
locurran
closed
3 years ago
4
Eigenstrat for 3 subpopulations
#66
tahseen-igib
opened
3 years ago
4
Unable to "make install"
#65
ghost
opened
3 years ago
1
mergeit not working as expected
#64
AdrienOliva
closed
3 years ago
2
smartpca decimal places
#63
brautaz
closed
3 years ago
9
"cd src; make" problem while installing
#62
treccanimirko
closed
3 years ago
2
Converted *.ancestrymapgeno still a binary file
#61
wodemaomaozhenkeai
opened
3 years ago
5
No 'convertf file' in bin
#60
Skylette14
closed
3 years ago
3
fatalx: OOPS snp file has changed since genotype file was created Aborted (core dumped)
#59
MaryBioinfo
closed
3 years ago
1
Compiled programs no longer in bin
#58
kjohnsen
opened
3 years ago
3
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