KastanDay ML4Bio issues

KastanDay / ML4Bio

LLMs to execute Bioinformatics workflows, esp. RNA-seq

MIT License

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Create a full command line executable workflow for RNA-Seq on PBMC Samples. Open a new pull request (on a separate branch) and comment the PR number here when you're done.

#51 KastanDay opened 7 months ago
0
Create a full command line executable workflow for RNA-Seq on PBMC Samples. Open a new pull request (on a separate branch) and comment the PR number here when you're done

#50 KastanDay opened 7 months ago
0
Update README

#49 lil-jr-dev[bot] opened 8 months ago
0
RNA Sequencing PBMC

#48 lil-jr-dev[bot] opened 8 months ago
0
RNA-Seq Workflow Implementation

#47 lil-jr-dev[bot] opened 8 months ago
2
Create a full command line executable workflow for RNA-Seq on PBMC Samples. Open a new pull request (on a separate branch) and comment the PR number here when you're done

#46 KastanDay opened 8 months ago
3
Create a full command line executable workflow for RNA-Seq on PBMC Samples. Open a new pull request (on a separate branch) and comment the PR number here when you're done

#45 rohan-uiuc opened 8 months ago
0
RNA-Seq Workflow Implementation

#44 lil-jr-dev[bot] opened 9 months ago
1
RNA-Seq Workflow for PBMC Samples (✓ Sandbox Passed)

#43 sweep-ai[bot] opened 10 months ago
2
Sweep: Create a full command line executable workflow for RNA-Seq on PBMC Samples. Open a new pull request (on a separate branch) and comment the PR number here when you're done

#42 KastanDay opened 10 months ago
1
Configure Sweep

#41 sweep-ai[bot] opened 10 months ago
1
Create a full command line executable workflow for RNA-Seq on PBMC Samples

#40 lil-jr-dev[bot] opened 10 months ago
0
Create RNA-Seq workflow for PBMC Samples

#39 lil-jr-dev[bot] opened 10 months ago
0
RNASeq_PBMC_Workflow_v2

#38 lil-jr-dev[bot] opened 10 months ago
0
Implement a command line executable workflow for RNA-Seq on PBMC Samples. Open a new pull request on a separate branch and comment the PR number here once done.

#37 minump opened 10 months ago
5
RNA-Seq Workflow Implementation

#36 lil-jr-dev[bot] opened 10 months ago
0
RNA-Seq Workflow Implementation

#35 lil-jr-dev[bot] opened 10 months ago
0
RNA-Seq Workflow Implementation

#34 lil-jr-dev[bot] opened 10 months ago
0
Create a full command line executable workflow for RNA-Seq on PBMC Samples. Open a new pull request (on a separate branch) and comment the PR number here when you're done.

#33 KastanDay opened 10 months ago
26
Transformer Implementation

#32 lil-jr-dev[bot] opened 10 months ago
0
Transformer Decoder Implementation

#31 lil-jr-dev[bot] opened 10 months ago
1
RNASeq PBMC Workflow v2

#30 lil-jr-dev[bot] opened 10 months ago
0
RNA-Seq Workflow

#29 lil-jr-dev[bot] opened 10 months ago
0
Create a full command line executable workflow for RNA-Seq on PBMC Samples

#28 lil-jr-dev[bot] opened 10 months ago
0
RNASeq-PBMC-Workflow

#27 lil-jr-dev[bot] opened 10 months ago
1
RNA-Seq-PBMC-Workflow_v1

#26 lil-jr-dev[bot] opened 10 months ago
0
RNASeq Analysis Update

#25 lil-jr-dev[bot] opened 10 months ago
0
RNASeq Analysis Update

#24 lil-jr-dev[bot] opened 10 months ago
0
RNASeq PBMC Workflow

#23 lil-jr-dev[bot] opened 10 months ago
0
Update: RNA-Seq Workflow for PBMC Samples

#22 lil-jr-dev[bot] opened 10 months ago
0
Create a full command line executable workflow for RNA-Seq on PBMC Samples. Open a PR on different branch once finished.

#21 minump opened 10 months ago
116
RNA-Seq Analysis Updates

#20 lil-jr-dev[bot] opened 10 months ago
0
Create a full command line executable workflow for RNA-Seq on PBMC Samples. Open a new pull request (on a separate branch) and comment the PR number here when you're done.

#19 rohan-uiuc opened 10 months ago
15
Create a full command line executable workflow for RNA-Seq on PBMC Samples. Open a new pull request (on a separate branch) and comment the PR number here when you're done

#18 rohan-uiuc opened 10 months ago
2
Transformer Implementation

#17 lil-jr-dev[bot] opened 10 months ago
0
Create a detailed implementation of a Transformer neural network (decoder only GPT-style) in PyTorch. I'll use this as a teaching material for new students to PyTorch

#16 TaoHeyi opened 10 months ago
6
Create a detailed implementation of a Transformer neural network (decoder only GPT-style) in PyTorch. I'll use this as a teaching material for new students to PyTorch

#15 KastanDay opened 10 months ago
35
Create a full command line executable workflow for RNA-Seq on PBMC Samples. Open a new pull request (on a separate branch) and comment the PR number here when you're done

#14 rohan-uiuc opened 11 months ago
19
Write code for RNA-Sequencing on PBMC sampling with detailed documentations

#13 minump opened 11 months ago
94
Replicate the workflow in https://programming-workshops.readthedocs.io/en/latest/workshops/02_R/Workshop_R.html and create a PR

#12 rohan-uiuc opened 11 months ago
3
Navigate to https://programming-workshops.readthedocs.io/en/latest/workshops/02_R/Workshop_R.html, download the dataset using shell and replicate the entire workflow, commit the changes to a new branch and create a PR.

#11 rohan-uiuc opened 11 months ago
6
Create a full command line executable workflow for RNA-Seq on PBMC Samples. Open a new pull request (on a separate branch) and comment the PR number here when you're done.

#10 rohan-uiuc opened 11 months ago
21
RNA-Seq Workflow for PBMC Samples

#9 lil-jr-dev[bot] opened 11 months ago
0
Create a full command line executable workflow for RNA-Seq on PBMC Samples. Open a new pull request (on a separate branch) and comment the PR number here when you're done.

#8 KastanDay opened 11 months ago
61
Create a full command line executable workflow for RNA-Seq on PBMC Samples. Open a new pull request (on a separate branch) and comment the PR number here when you're done.

#7 KastanDay opened 11 months ago
19
Create the workflow in python notebook for RNA-Seq on PBMC Samples and create a PR to the main branch.

#6 rohan-uiuc opened 11 months ago
10
Create the workflow in a jupyter notebook for RNA-Seq on PBMC Samples and create a PR to the main branch.

#5 rohan-uiuc opened 11 months ago
1
Create a full command line executable workflow for RNA-Seq on PBMC Samples. Open a new pull request (on a separate branch) and comment the PR number here when you're done.

#4 KastanDay opened 11 months ago
5
Create a full command line executable workflow for RNA-Seq on PBMC Samples.

#3 KastanDay opened 11 months ago
1
Create the workflow for RNA-Seq on PBMC Samples.

#2 rohan-uiuc opened 11 months ago
17