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Knowledge-Graph-Hub
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kg-covid-19
An instance of KG Hub to produce a knowledge graph for COVID-19 response.
https://github.com/Knowledge-Graph-Hub/kg-covid-19/wiki
BSD 3-Clause "New" or "Revised" License
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Fix ansible ssh error when pushing Blazegraph journal to SPARQL endpoint
#423
justaddcoffee
closed
2 years ago
1
Problem pushing blazegraph journal to SPARQL endpoint in Jenkins
#422
justaddcoffee
closed
2 years ago
9
Fix deploy blazegraph stage run jenkins
#421
justaddcoffee
closed
2 years ago
1
Fix call to ansible-playbook by setting home directory to pwd
#420
justaddcoffee
closed
2 years ago
1
Upgrade to KGX 1.1.0 / implement support for API calls in download.yaml / update ChEMBL ingest to build 28
#419
justaddcoffee
closed
2 years ago
1
Upgrade to KGX 1.1.0
#418
justaddcoffee
closed
3 years ago
1
Update to KGX 1.1.0
#417
justaddcoffee
closed
3 years ago
1
Upgrade to KGX 1.1.0
#416
justaddcoffee
closed
3 years ago
2
Upgrade to KGX 1.1.0
#415
justaddcoffee
closed
3 years ago
2
Upgrade to KGX 1.1.0
#414
justaddcoffee
closed
3 years ago
1
Upgrade to KGX 1.1.0
#413
justaddcoffee
closed
3 years ago
2
Fix int error 3 run jenkins
#412
justaddcoffee
closed
3 years ago
2
Upgrade to KGX 1.1.0
#411
justaddcoffee
closed
3 years ago
2
Make a docker image to facilitate development on all kg-* projects and KGX
#410
justaddcoffee
closed
2 years ago
13
Fix problem with int size during KGX merge step
#409
justaddcoffee
closed
3 years ago
2
Fix call to kgx.graph_operations.summarize_graph.generate_graph_stats
#408
justaddcoffee
closed
3 years ago
1
Fix merge_jenkins.yaml
#407
justaddcoffee
closed
3 years ago
1
Add linkml-model to setup.py
#406
justaddcoffee
closed
3 years ago
1
Update kgx version to 1.1.0
#405
justaddcoffee
closed
3 years ago
0
Add Chebi to merged graph
#404
justaddcoffee
closed
3 years ago
1
What is the zhou_host_protein transformed dataset?
#403
linikujp
closed
3 years ago
1
Installing the requirements file doesn't work
#402
Leoningel
closed
3 years ago
3
Enhance and reorganize documentation
#401
cmungall
closed
2 years ago
2
Fix seed in holdouts, which was erroneously being hardcoded to 42
#400
justaddcoffee
closed
3 years ago
1
Remove pyshex pin to 0.7.14
#399
justaddcoffee
closed
3 years ago
1
Fix SPARQL queries metadata for grlc API
#398
vemonet
closed
3 years ago
1
in Sankey plot/dashboard transform node and edge category counts to log scale
#397
realmarcin
opened
3 years ago
0
Fix the SPARQL queries in queries/sparql
#396
vemonet
closed
3 years ago
4
Workaround to standardize GOCAM edge/node file names
#395
justaddcoffee
closed
3 years ago
1
Filename error in transformed graphs
#394
LucaCappelletti94
closed
2 years ago
2
Remove unused Query class
#393
justaddcoffee
closed
3 years ago
1
Update scibite to 16
#392
justaddcoffee
closed
3 years ago
2
Two random data bugs
#391
justaddcoffee
closed
3 years ago
1
Fix bug in sars-cov-2-gene_annot ingest
#390
justaddcoffee
closed
3 years ago
2
Update chembl
#389
justaddcoffee
closed
3 years ago
3
Add query for drug -> drug targets
#388
justaddcoffee
closed
3 years ago
7
update SciBite ingest to version 1.6
#387
justaddcoffee
closed
3 years ago
1
Improve normalization of proteins
#386
justaddcoffee
opened
3 years ago
1
Add some kind of protection for accidental deletion of KG-COVID-19 builds
#385
justaddcoffee
closed
3 years ago
6
untested fix for SciBite PR: -> UniProtKB: prefix normalization
#384
realmarcin
opened
3 years ago
0
Add a clove of grlc
#383
justaddcoffee
closed
3 years ago
0
Added a few chembl tests
#382
justaddcoffee
closed
3 years ago
2
migrate to main KGX branch
#381
justaddcoffee
closed
2 years ago
3
Update kgx to v1.1.0
#380
justaddcoffee
closed
3 years ago
7
ORF10 missing in GPI file source
#379
realmarcin
opened
3 years ago
0
Need to migrate from travis-ci.org to either GH actions or travis-ci.com
#378
justaddcoffee
closed
3 years ago
1
Fix pyshex issue run jenkins
#377
justaddcoffee
closed
3 years ago
6
interactions disappeared between 20201001 and 20201101 nt files
#376
realmarcin
opened
3 years ago
1
ACE2 interaction present in nt but missing in tsv (20201001 release)
#375
realmarcin
closed
3 years ago
3
convert example queries from bespoke yaml to garlic (grlc)
#374
cmungall
closed
3 years ago
1
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