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PRIDE-Archive
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xi-mzidentml-converter
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updates to DB schema
#76
colin-combe
closed
2 weeks ago
0
Parsing dataset after schema change
#75
sureshhewabi
opened
3 weeks ago
1
Update setup.py Add authors
#74
do-dmitri
closed
2 weeks ago
0
update to pyteomics 4.7.3 / add indexes
#73
colin-combe
closed
1 month ago
0
version 0.2.0
#72
colin-combe
closed
1 month ago
0
Support for the first Mascot submission
#71
ypriverol
opened
1 month ago
11
Issues for the web from discussion 25/06/2024
#70
ypriverol
closed
1 month ago
14
update pipfile?
#69
colin-combe
closed
4 months ago
0
traceback in logging; fix scores
#68
colin-combe
closed
4 months ago
0
fixes for MS2 files
#67
colin-combe
closed
4 months ago
0
fix create_db_schema; fix tests; reduce memory use
#66
colin-combe
closed
4 months ago
0
fix - SearchModifications and Enzymes are optional
#65
colin-combe
closed
4 months ago
0
fix for elements that should be optional
#64
colin-combe
closed
4 months ago
0
Datasets from SIM-XL, Mascot and ProteomeDiscover in PRIDE
#63
ypriverol
opened
4 months ago
21
Inconsistent residue pairs output
#62
aozalevsky
opened
4 months ago
29
delete api from coverter / delete converter from api
#61
colin-combe
closed
5 months ago
5
valid accession numbers but missing names and gene names?
#60
colin-combe
opened
5 months ago
0
buttons that don't do anything at top of crosslinking page?
#59
colin-combe
opened
5 months ago
0
Request a correction on URL
#58
sureshhewabi
closed
5 months ago
3
Sync filename keys for the PDB-Dev endpoints
#57
aozalevsky
closed
5 months ago
5
Few small Issues to check
#56
sureshhewabi
closed
5 months ago
1
maintain the crosslining datasets within PRIDE archive
#55
sureshhewabi
closed
5 months ago
1
Rate Limit
#54
sureshhewabi
closed
6 months ago
3
FAST-API version?
#53
colin-combe
closed
6 months ago
1
query visualisation failed error
#52
sureshhewabi
closed
6 months ago
6
pagination issue (dataset page)?
#51
colin-combe
closed
6 months ago
7
Pagination Issue
#50
sureshhewabi
closed
6 months ago
2
xiview is not working
#49
ypriverol
closed
6 months ago
13
Add the publication accession
#48
ypriverol
closed
6 months ago
3
update crosslinking submission guidelines
#47
colin-combe
closed
7 months ago
1
add prot accession to pdbDev endpoints
#46
colin-combe
closed
7 months ago
2
Check Loading time
#45
sureshhewabi
closed
6 months ago
3
PDB-Dev endpoint timing out
#44
colin-combe
closed
5 months ago
33
Perform the first submission in PDB and PRIDE Archive
#43
ypriverol
opened
7 months ago
0
For every protein in PDBDev we should aim to have the list of datasets in crosslinking resource.
#42
ypriverol
closed
6 months ago
1
Work with the iPRG group to do complete submision for the study in 2023
#41
ypriverol
closed
7 months ago
0
Contact other software providers MaxQuant, Mascot OpenMS to perform submissions for the 3DProteomics
#40
ypriverol
closed
7 months ago
2
A dataset page should be created for every project
#39
ypriverol
closed
7 months ago
0
The accessions in the dataset table should be links to the original dataset in PRIDE Archive.
#38
ypriverol
closed
6 months ago
2
Protein search in the protein details table
#37
ypriverol
closed
7 months ago
1
In the dataset table fix the title truncated
#36
ypriverol
closed
7 months ago
1
Parse the rest of the large datasets from PRIDE Infrastructure
#35
ypriverol
closed
6 months ago
1
add accession numbers to PDB-Dev endpoint output
#34
colin-combe
closed
7 months ago
4
Crosslinking + 3Dproteomics 1.2: Tasks and Issues.
#33
sureshhewabi
closed
7 months ago
1
minor change to PDB-Dev endpoint URL
#32
colin-combe
closed
8 months ago
0
missing await keywords?
#31
colin-combe
closed
8 months ago
0
include Edinburgh Uni in credits
#30
colin-combe
closed
7 months ago
1
Overall Statistics panel
#29
colin-combe
closed
7 months ago
5
some renaming of API endpoints
#28
colin-combe
closed
8 months ago
1
number of crosslinked peptides is always the same as the number of peptides? Check this.
#27
colin-combe
closed
7 months ago
2
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