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QuKunLab
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SpatialBenchmarking
BSD 2-Clause "Simplified" License
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Dataset Missing
#29
noob000007
opened
1 month ago
1
conda env create -f Benchmarkingenvironment.yml
#28
noob000007
opened
1 month ago
0
Tangram, i can not find this imputation in the repo?
#27
noob000007
opened
1 month ago
0
Can't reproduce results in Figure 2a-b
#26
vladimirkovacevic
opened
1 month ago
0
Rationale of calculating JS
#25
Puriney
opened
1 month ago
1
Raw data request
#24
luckylucky801
opened
2 months ago
0
The lack of spatial information in ST data
#23
tqwang743
opened
10 months ago
0
The Kernel crashed when importing ncem
#22
ShuangWang1
closed
10 months ago
0
Ground truth select of spatial transcriptomic datasets
#21
CaiusZ7
opened
11 months ago
0
Cannot download the datasets mentioned in the tutorial
#20
HelloWorldLTY
opened
1 year ago
2
Issue with dependencies in installing into conda env
#19
arnoldchang1
opened
1 year ago
0
Simulated data from scRNA data Example Error
#18
monoplasty
opened
1 year ago
0
negative values in some of the datasets
#17
tonyyang1995
opened
1 year ago
0
It seems the 32 simulated spatial datasets are not so "spatial"
#16
hurazh
opened
1 year ago
1
Error - running test run.
#15
vinsilico
closed
2 years ago
1
Cannot reproduce the results in Figure 4
#14
TianyouLuo
opened
2 years ago
1
Input of the scRNA count link in the SimulatedData.ipynb
#13
zyllluck
closed
2 years ago
0
DestVI performance
#12
canergen
opened
2 years ago
0
Ground truth of dataset4 in Figure4
#11
lzygenomics
closed
2 years ago
4
information on datasets
#10
giovp
closed
2 years ago
4
Normalization is only for scRNA data
#9
sinanugur
closed
2 years ago
2
Raw data cause overestimated performance when measured by PCC
#8
Czh3
closed
2 years ago
9
Still have error in reproducing “Tutorial.ipynb”: deconvolution part
#7
jiawei-zhong
closed
2 years ago
1
Code for figure4c & 4d
#6
lzygenomics
closed
2 years ago
2
Error in reproducing “Tutorial.ipynb”: deconvolution part
#5
jiawei-zhong
closed
2 years ago
1
scRNA-seq data of figure 4
#4
lzygenomics
closed
2 years ago
4
PCC & SSIM in deconvoluting methods
#3
lzygenomics
closed
2 years ago
2
Incomplete file BLAST_CelltypeDeconvolution.ipynb
#2
canergen
closed
2 years ago
4
Create LICENSE
#1
QuKunLab
closed
3 years ago
0