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RTXteam
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RTX-KG2
Build system for the RTX-KG2 biomedical knowledge graph, part of the ARAX reasoning system (https://github.com/RTXTeam/RTX)
MIT License
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Merge pull request #426 from RTXteam/issue-420
#427
saramsey
closed
1 week ago
0
Issue 420
#426
saramsey
closed
1 week ago
0
Merge pull request #424 from RTXteam/issue-420
#425
saramsey
closed
1 week ago
0
Merge pull request #423 from RTXteam/master
#424
saramsey
closed
1 week ago
0
#421
#423
saramsey
closed
1 week ago
0
Issue 420
#422
saramsey
closed
1 week ago
0
KG2pre build instance setup script should install jq by default
#421
saramsey
opened
2 weeks ago
0
RTX-KG2 needs to ETL the UNII identifiers list
#420
saramsey
opened
2 weeks ago
2
CTKP Castleman treats edge not returned from KG2.10.1
#419
amykglen
opened
3 weeks ago
18
Unsecret Agent reports an issue with the KG2.10.1pre edges file that Steve Ramsey provided to them
#417
saramsey
closed
1 month ago
3
Clinical Trials KP edge predicates are malformed - double 'biolink' prefix - e.g., "biolink:biolink_treats"
#416
amykglen
opened
1 month ago
1
gene -- causes -> phenotype edge from uniprot?
#415
amykglen
opened
1 month ago
4
Wrong infores curie used on Clinical Trials KP edges (infores:biothings-multiomics-clinicaltrials)
#414
amykglen
opened
1 month ago
2
add TOC to README
#413
dkoslicki
closed
2 months ago
0
ETL Drug Approvals KP into RTX-KG2.10.2pre
#412
saramsey
opened
2 months ago
3
Merging KG2.10.1 build code
#411
ecwood
closed
2 months ago
0
Node Normalization of conflation for T1D
#410
jaredroach
opened
2 months ago
0
Pull File from S3 Bucket when cURL Fails
#409
ecwood
opened
2 months ago
0
Build KG2.10.1
#408
ecwood
closed
2 months ago
2
PathWhiz?
#407
cbizon
opened
3 months ago
3
KL/AT Updates
#406
ecwood
opened
3 months ago
0
New Node Categorization System For Ontologies
#405
ecwood
closed
2 months ago
2
Upgrade to Biolink 4.2.1 for KG2.10.1
#404
ecwood
closed
2 months ago
1
Handling Mondo's `disease_responds_to` edges
#403
ecwood
opened
4 months ago
0
drug_regulatory_status_world_wide is not a valid predicate
#402
amykglen
opened
4 months ago
3
Should we ETL "SMILE" information for small molecule compounds, into KG2pre?
#401
saramsey
opened
4 months ago
3
Orphanet Curie Prefix Should Be Lowercase
#400
ecwood
closed
2 months ago
1
Code Cleanup
#399
ecwood
opened
4 months ago
3
ETL Clinical Trials KP
#398
ecwood
closed
2 months ago
1
Should `edge_id`'s use the `core_predicate` when there is no `qualified_predicate`?
#397
ecwood
opened
4 months ago
0
Subject Qualifiers
#396
ecwood
opened
4 months ago
0
Build KG2.10.0
#395
ecwood
closed
4 months ago
3
KG2.9.3 Code
#394
ecwood
closed
4 months ago
0
Remove Clinical Trials Information from KG2
#393
ecwood
closed
2 months ago
2
Edge Blocklist
#392
ecwood
closed
2 months ago
1
`infores:nddf-umls` is deprecated
#391
ecwood
opened
5 months ago
0
Evaluate Which Dependencies Are Actually Needed
#390
ecwood
closed
2 months ago
1
Should we archive old code in the KG2 repository?
#389
ecwood
closed
4 months ago
1
Evaluate How to Handle the Problematic Edges Returned in ARAX Query for "What Causes Autism?"
#388
ecwood
closed
2 months ago
2
Remove Ontobio from the Build System
#387
ecwood
closed
2 months ago
4
Consider Removing Retracted Papers from RTX-KG2
#386
ecwood
opened
5 months ago
0
Missing Source Predicates
#385
ecwood
closed
4 months ago
1
SemMedDB (Final) Update
#384
ecwood
opened
5 months ago
0
DrugBank Drug Interaction Sentences Seem to Be of a Standard Type
#383
ecwood
opened
5 months ago
6
Update DrugBank
#382
ecwood
opened
5 months ago
0
Biolink v4.2.0 Incompatibilities
#381
ecwood
opened
5 months ago
5
Infores Registry is Decoupled from Biolink Model
#380
ecwood
closed
4 months ago
1
Need to Upgrade from Python 3.7
#379
ecwood
opened
5 months ago
4
CI is Broken
#378
ecwood
closed
4 months ago
1
incorrect subclass-of edge in KG2.9.0pre
#377
saramsey
opened
6 months ago
0
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