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RitchieLabIGH
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IRFinder
MIT License
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majority of reads skipped in Long mode
#44
Perugolate
closed
1 week ago
2
`minimap2` not found in singularity image
#43
Perugolate
closed
1 week ago
1
IR-dinder-s
#42
adi8897
opened
6 months ago
0
Differential IR Analysis With Replicates
#41
adi8897
closed
6 months ago
0
BMA mode
#40
adi8897
opened
7 months ago
1
Force IRFinder to generate IRFinder-IR-dir.txt
#39
ZJURenyi
opened
8 months ago
4
/lib64/libm.so.6: version `GLIBC_2.27' not found
#38
ydy1127
opened
8 months ago
4
Quick question about two outputs: idr v.s. nonidr
#37
progistar
closed
7 months ago
2
/usr/local/IRFinder/bin/util/irfinder: error while loading shared libraries: libboost_iostreams.so.1.71.0: cannot open shared object file: No such file or directory
#36
Chao-Kong
opened
10 months ago
1
Did not have any hint or error
#35
houruiyan
opened
11 months ago
1
I want to use Nanopore_cDNA_data
#34
tabatakenshiro
opened
11 months ago
2
Adaptor trimming option
#33
rezarahman12
closed
11 months ago
2
Segmentation fault (core dumped) when run IRfinder BAM
#32
yalanyang
opened
1 year ago
3
IRBase2.0 Batch Download
#31
celinehohzm
opened
1 year ago
2
IRFinder diff - Deseq2 problem with too many elements in a line
#30
nkaplin1
closed
1 year ago
1
Unknown value '-nan' in IRratio column
#29
aman-akash
opened
1 year ago
3
IRFinder Diff output tsv alphabetical?
#28
KwameForbes
closed
1 year ago
2
IRFinder Diff output interpretations
#27
rezarahman12
closed
1 year ago
4
IRFinder Diff results p-value
#26
rezarahman12
closed
1 year ago
1
IRFinder Diff
#25
rezarahman12
closed
1 year ago
6
builiding reference posting to both IRFinder githubs
#24
pillailab
opened
1 year ago
4
IRFinder diff /error with number of rows
#23
hemaris-8b
opened
1 year ago
2
Mappability
#22
beaferbl
closed
1 year ago
4
Problem with IRFinderDiff
#21
JYuyangLu
closed
1 year ago
3
IR-Finder with long readds
#20
genotoul
opened
1 year ago
6
IRFinder failing to build reference with UCSC format files
#19
gabrieljaykay
opened
1 year ago
1
Incorrect intron start/stop coordinates and partially incorrect static warning
#18
Waldehead
closed
1 year ago
4
Error running BAM
#17
KwameForbes
closed
1 year ago
2
IRFinder differential analysis
#16
bmb13
closed
1 year ago
4
IRFinder Diff Interpretation
#15
mguaita
opened
2 years ago
1
System limitation: 32GB RAM
#14
mguaita
closed
2 years ago
4
IRFinder compatibility Check
#13
anoopktiwari
closed
2 years ago
1
IRBase website down
#12
pirocv
closed
2 years ago
2
20881 Segmentation fault
#11
mguaita
closed
2 years ago
1
Feature request: Further output
#10
jscaber
closed
2 years ago
3
IRFinder Diff Arguments
#9
jscaber
closed
2 years ago
2
Unable to load DESeq2 under singularity
#8
glarue
closed
2 years ago
1
error while loading shared libraries: libboost_iostreams.so.1.65.1
#7
L1angyan
closed
2 years ago
3
Conda Package?
#6
jscaber
closed
2 years ago
6
segmentation fault error
#5
lyj95618
closed
2 years ago
7
IRFinder Diff ERROR: __main__:Unknown error: (<class 'TypeError'>, TypeError("calculate_delta_psi() missing 1 required positional argument: 'nan_th'",)
#4
Floyd1229
closed
2 years ago
10
BuildRefProcess: limitGenomeGenerateRAM=31000000000is too small for your genome
#3
Floyd1229
closed
2 years ago
3
Error: which: no winflat in (list of PATHS)
#2
Floyd1229
closed
2 years ago
9
FATAL: Failed to create reference base dir
#1
Floyd1229
closed
2 years ago
3