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SATAY-LL
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SATAY-DOWNSTREAM-ANALYSIS
This repo contains some downstream analysis for satay data.
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Uncertainty fitness
#19
leilaicruz
opened
2 years ago
1
Neutral genes
#18
leilaicruz
opened
2 years ago
1
use neutral genes + distribution to find deviation of high/lowfitness genes
#17
FloorDolsma
opened
2 years ago
0
Transposon insertion sequencing: a new tool for systems-level analysis of microorganisms
#16
leilaicruz
opened
3 years ago
2
Extensible full DAG streaming computation server with services and jobs for RNA-Seq, Tn-Seq, WG-Seq and Term-Seq.
#15
leilaicruz
opened
3 years ago
1
Compare replicates
#14
leilaicruz
opened
3 years ago
0
code to compute confidence intervals of reads
#13
FloorDolsma
opened
3 years ago
1
Calculate chance of getting few transposons due to stochasticity
#12
FloorDolsma
opened
3 years ago
0
Determine upper bound of fitness score for genes without transposons
#11
FloorDolsma
opened
3 years ago
0
Normalize using regional transposon densities
#10
FloorDolsma
opened
3 years ago
0
Compensate for centromere bias
#9
FloorDolsma
opened
3 years ago
0
Average over datasets of multiple (biological or technical) replicates
#8
FloorDolsma
opened
3 years ago
0
Determine onfidence interval for sampling
#7
FloorDolsma
opened
3 years ago
1
Outlier analysis
#6
FloorDolsma
opened
3 years ago
0
Reference SATAY experiment to find the insertion locations with bias
#5
FloorDolsma
opened
3 years ago
0
Take middle 80% of gene with transposons
#4
leilaicruz
opened
3 years ago
0
more data added to compare WT1 and WT2
#3
FloorDolsma
closed
3 years ago
2
ChromosomeRegion_AllGenes.tsv datafile missing in datasets
#2
leilaicruz
closed
3 years ago
2
adding files to compare technical replicates
#1
FloorDolsma
closed
3 years ago
0