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SBC-Utrecht
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pytom-match-pick
GPU-accelerated template matching for cryo-ET
https://sbc-utrecht.github.io/pytom-match-pick/
GNU General Public License v2.0
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API changes before 1.0
#231
sroet
opened
1 week ago
0
Drop py 39 and upgrade
#230
sroet
closed
3 days ago
1
Relion5 input
#229
McHaillet
opened
1 week ago
1
add check on input gpu indices
#228
sroet
closed
1 month ago
1
Add bins option to both the tophat and extraction plot
#227
sroet
closed
1 month ago
1
Get tutorial-tests.yml working
#226
sroet
closed
1 month ago
5
Update tutorial-tests.yml
#225
sroet
closed
1 month ago
1
deal with new ruff version and next try for tutorial-test.yml
#224
sroet
closed
1 month ago
1
logging.warn will be deprecated
#223
McHaillet
closed
1 month ago
1
Enable 16 bit output
#222
sroet
closed
1 month ago
3
Fix relion5 compat
#220
McHaillet
closed
1 month ago
2
add comment to entry_points that tells developers not to use line bre…
#219
McHaillet
closed
1 month ago
1
Create CITATION.cff
#218
sroet
closed
1 month ago
2
feature: calculate subvolume defocus values
#217
McHaillet
closed
1 month ago
2
add E501 check
#216
sroet
closed
1 month ago
3
add ruff E501 to format comments and docstrings
#215
McHaillet
closed
1 month ago
0
Extracting subtomos in RELION5 with particles.star file not working
#214
Phaips
closed
1 month ago
10
add a citation file to the repository
#213
McHaillet
closed
1 month ago
1
site updates: fix some usage informations, make authorship clear, add logo
#212
McHaillet
closed
1 month ago
1
add check on tomo mask shape
#210
sroet
closed
1 month ago
1
Add ignore tomo mask option
#209
sroet
closed
1 month ago
1
Quesion about the appropriate tomograms for pytom picking
#208
McHaillet
closed
1 month ago
0
Add --ignore-tomogram-mask option to pytom_estimate_roc.py and pytom_ extract_candidates.py
#207
sroet
closed
1 month ago
0
Update Developers.md
#205
McHaillet
closed
2 months ago
1
update workflow permission to write github pages
#204
McHaillet
closed
2 months ago
4
fix: strings signs in deploy docs workflow
#203
McHaillet
closed
2 months ago
1
Update README.md
#202
sroet
closed
2 months ago
4
Quick fix README and workflow
#201
McHaillet
closed
2 months ago
2
delete wiki and change links once site is up
#200
McHaillet
closed
2 months ago
4
mkdocs site for pytom-match-pick
#199
McHaillet
closed
2 months ago
2
fix defocus help unit
#197
sroet
closed
2 months ago
6
add to sbgrid
#196
McHaillet
closed
2 weeks ago
1
Overflow error with tomogram
#195
frozenfas
closed
2 months ago
15
--tomogram-mask option during match_template not working
#194
Phaips
closed
1 month ago
5
revert healpix workaround
#193
sroet
closed
3 months ago
6
bug fix: add int type for rng seed
#192
McHaillet
closed
3 months ago
1
TypeError in match_template
#191
Phaips
closed
3 months ago
2
RELION-5 input compatibility
#190
rdrighetto
opened
3 months ago
2
fix: make output directories for tutorial tests
#189
McHaillet
closed
3 months ago
1
Update pyproject.toml
#188
sroet
closed
3 months ago
3
add tutorial test yml
#187
sroet
closed
3 months ago
4
Add DOI badge to readme.md
#186
sroet
closed
3 months ago
2
Add tomogram mask option for template matching
#185
sroet
closed
3 months ago
4
fix symmetry bug
#184
sroet
closed
4 months ago
1
pre-commit with ruff
#183
McHaillet
closed
3 months ago
10
phase randomization score map correction
#182
McHaillet
closed
4 months ago
2
calculate angular search from particle diameter
#181
McHaillet
closed
4 months ago
3
z-axis rotational symmetry
#180
McHaillet
closed
4 months ago
3
Center of mass fix
#179
McHaillet
closed
4 months ago
2
Relion5 compatibility
#178
McHaillet
closed
4 months ago
1
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