SHZ66 zinba issues - Githubissues

SHZ66 / zinba

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segfault error with the 2.03.1 version of zinba

#80 GoogleCodeExporter opened 8 years ago
0
"core dumped" abort error running run.zinba()

#79 GoogleCodeExporter opened 8 years ago
1
Install error

#78 GoogleCodeExporter opened 8 years ago
2
ERROR: failed to generate info file using twoBitInfo

#77 GoogleCodeExporter opened 8 years ago
0
Compile error on package install

#76 GoogleCodeExporter opened 8 years ago
1
ERROR: failed to generate info file using twoBitInfo

#75 GoogleCodeExporter opened 8 years ago
2
run zinba as nohup <command> &

#74 GoogleCodeExporter opened 8 years ago
2
Installation problem with MAC OS X 10.10

#73 GoogleCodeExporter closed 8 years ago
5
zinba installation broken

#72 GoogleCodeExporter closed 8 years ago
5
>2.02.0 .tar.gz archives are broken. I downloaded all tar.gz above this version, none can be installed

#71 GoogleCodeExporter closed 8 years ago
2
zinba crashes with error: cannot open file 'peaks_files/peaks.list': No such file or directory

#70 GoogleCodeExporter closed 8 years ago
2
Missing multicore package

#69 GoogleCodeExporter opened 8 years ago
4
Regarding covariate selection

#68 GoogleCodeExporter opened 8 years ago
0
run.zinba() requests base alignment file when refinepeaks=0; attempt to run basealigncount() kills R

#67 GoogleCodeExporter opened 8 years ago
4
building windows was unsuccssful

#66 GoogleCodeExporter opened 8 years ago
2
*** caught segfault *** address 0x3604eb2, cause 'memory not mapped'

#65 GoogleCodeExporter opened 8 years ago
2
Segfault running run.zinba

#64 GoogleCodeExporter opened 8 years ago
0
Compatibility with R 3.1.0 for Windows?

#63 GoogleCodeExporter opened 8 years ago
1
Error while run.zinba

#62 GoogleCodeExporter opened 8 years ago
0
Error in covariateselect

#61 GoogleCodeExporter opened 8 years ago
0
discrepancy 2bit and fasta file concerning extra "chromosomes" (e.g.chr6_ssto_hap7)?

#60 GoogleCodeExporter opened 8 years ago
0
Segault on running zinba function

#59 GoogleCodeExporter opened 8 years ago
0
Unable to open alignability file outdirAlignability/.wig

#58 GoogleCodeExporter opened 8 years ago
0
Inconsistent Merging windows

#57 GoogleCodeExporter opened 8 years ago
0
Installation Error

#56 GoogleCodeExporter opened 8 years ago
4
issue with mappability scoring algorithm

#55 GoogleCodeExporter opened 8 years ago
0
Error in twigfiles[[i]] : subscript out of bounds when running zinba()

#54 GoogleCodeExporter opened 8 years ago
0
covselect.R: all models failed after model selection intermediate step

#53 GoogleCodeExporter opened 8 years ago
0
Unable to get chromosome length from .2bit file

#52 GoogleCodeExporter opened 8 years ago
1
alignability incomplete in test data (no chr22.wig file)

#51 GoogleCodeExporter opened 8 years ago
0
error while generating Alignability ( Abort trap: 6)

#50 GoogleCodeExporter opened 8 years ago
1
caught segfault when running generateAlignability

#49 GoogleCodeExporter opened 8 years ago
2
No results on ChromosomeV or X in C. elegans

#48 GoogleCodeExporter opened 8 years ago
0
Custom mappability file

#47 GoogleCodeExporter opened 8 years ago
1
difference between 2.02.03 and 2.01

#46 GoogleCodeExporter opened 8 years ago
0
Peak Visualization files

#45 GoogleCodeExporter opened 8 years ago
1
Customa mappability files

#44 GoogleCodeExporter opened 8 years ago
1
sequencing data length is 29*29

#43 GoogleCodeExporter opened 8 years ago
0
aught segfault when running basecountimport

#42 GoogleCodeExporter opened 8 years ago
0
Error in covariateselect

#41 GoogleCodeExporter opened 8 years ago
2
Mappability Pair-end 100x100

#40 GoogleCodeExporter opened 8 years ago
0
caught segfault when running generateAlignability

#39 GoogleCodeExporter opened 8 years ago
6
fail to call peaks on small chromosomes- sacCer3

#38 GoogleCodeExporter opened 8 years ago
1
NO output file generated

#37 GoogleCodeExporter closed 8 years ago
2
zinba 2.02.03 : caught segfault 'memory not mapped'

#36 GoogleCodeExporter closed 8 years ago
1
Different results obtained using basealigncount() between the versions( 2.01 and 2.02.03)

#35 GoogleCodeExporter closed 8 years ago
2
Generating mappability files for unpublished genome

#34 GoogleCodeExporter closed 8 years ago
3
zinba memory not mapped

#33 GoogleCodeExporter closed 8 years ago
2
Error when running zinba : can't open file

#32 GoogleCodeExporter closed 8 years ago
3
Mappability files for mm8 27nt

#31 GoogleCodeExporter closed 8 years ago
1