SPI-Birds pipelines issues

SPI-Birds / pipelines

Pipelines for generating a standard data format for bird data

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Cannot load pipelines in branch CAC_pipeline2024

#205 BarbaraClass opened 3 weeks ago
1
ClutchType_observed in HOC in wrong format

#204 BarbaraClass opened 3 weeks ago
0
Second batch of NIOO pipeline fixes

#203 StefanVriend closed 4 weeks ago
0
Recent fixes in NIOO pipeline

#202 StefanVriend closed 4 weeks ago
0
Add FOR pipeline

#201 BarbaraClass opened 1 month ago
0
Fix improbable chick ages in WYT

#200 StefanVriend opened 5 months ago
0
MON

#199 ameliefar opened 6 months ago
0
STR

#198 ameliefar opened 6 months ago
0
add "TEST" to the first line

#197 ameliefar opened 1 year ago
9
Update comments

#196 LiamDBailey opened 1 year ago
0
Fix RingSeason issue in NIOO pipeline

#195 StefanVriend closed 1 year ago
1
v2.0 updates

#194 StefanVriend opened 1 year ago
0
Delete comments

#193 LiamDBailey closed 1 year ago
0
Quality check updates

#192 StefanVriend closed 1 year ago
0
Check wing length measures: P3 vs total wing length

#191 StefanVriend opened 2 years ago
2
Quality check update

#190 StefanVriend closed 2 years ago
0
BRG pipeline

#189 cwtyson opened 2 years ago
1
Update GLA and GRO tests

#188 cwtyson closed 2 years ago
0
General tests

#187 cwtyson closed 3 years ago
1
Update to v1.1

#186 LiamDBailey opened 3 years ago
0
Allow for possibility of multiple clutches in GLA pipeline

#185 LiamDBailey opened 3 years ago
0
Changes to MON and UAN pipelines

#184 cwtyson closed 3 years ago
0
Edit run_pipelines

#183 cwtyson closed 3 years ago
1
WRS pipeline

#182 cwtyson opened 3 years ago
0
GRO pipeline

#181 cwtyson closed 3 years ago
0
Create package wide options that apply to all pipelines

#180 LiamDBailey opened 3 years ago
0
Update tests

#179 LiamDBailey closed 3 years ago
0
Fix ExperimentID in AMM

#178 LiamDBailey closed 3 years ago
0
Non standard format columns in location table

#177 cwtyson closed 3 years ago
1
Unusual ExperimentID values in brood data

#176 cwtyson opened 3 years ago
4
ExperimentID missing in AMM Capture data

#175 cwtyson closed 3 years ago
0
All NAs for ExperimentIDs in PARMAJ capture records

#174 cwtyson closed 3 years ago
6
Scientific notation in IndividualIDs in KIL data

#173 cwtyson closed 3 years ago
0
Removing incorrect IDs in IndividualID and LocationID columns

#172 cwtyson opened 3 years ago
8
Update B7: use experiment information

#171 StefanVriend closed 2 years ago
0
Fix issue with unique IndvID's within populations but not within datasets

#170 StefanVriend opened 3 years ago
19
Quality check and pipeline code fixes

#169 StefanVriend closed 3 years ago
1
Outstanding issue for UAN: individuals with no age record but caught on nest

#168 StefanVriend closed 3 years ago
0
Edit documentation on 'Age_calculated' in the standard protocol

#167 cwtyson opened 3 years ago
0
Adding format_GLA

#166 cwtyson closed 3 years ago
0
Example branch

#165 LiamDBailey closed 3 years ago
0
PET pipeline

#164 LiamDBailey opened 3 years ago
1
Update old pipelines

#163 StefanVriend closed 2 years ago
11
Updated to PEW pipeline

#162 zuzulaz opened 3 years ago
3
Quality check testrun

#161 StefanVriend closed 3 years ago
4
Create a HTML introduction for the quality check

#160 LiamDBailey closed 1 year ago
0
Adjust save path of quality check report

#159 LiamDBailey opened 3 years ago
0
Add summary of each check in the quality check report

#158 LiamDBailey closed 3 years ago
0
Check age of subsequent captures

#157 LiamDBailey closed 3 years ago
0
MTA pipeline

#156 zuzulaz opened 3 years ago
2