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SomaLogic
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SomaPlotr
A highly specialized suite of standardized plotting routines based on the "Grammar of Graphics" framework of mapping variables to aesthetics used in 'ggplot2'. Graphics types are biased towards visualizing SomaScan (proteomic) data.
https://somalogic.github.io/SomaPlotr/
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Bump year
#42
amanda-hi
closed
4 months ago
0
Bump version number in DESCRIPTION and README
#41
amanda-hi
closed
4 months ago
0
Resolve R CMD check failures
#40
amanda-hi
closed
4 months ago
1
Create more "concordant" snapshot image tests for `plotConcord()`
#39
stufield
opened
4 months ago
0
Re-assess OS requirements for snapshot unit tests
#38
amanda-hi
opened
4 months ago
0
Fix deprecated usage of `scale_name=` param in `discrete_scale()`
#37
stufield
closed
4 months ago
2
Update `gg` object for newest `ggplot2` version
#36
stufield
closed
4 months ago
0
Add "wrap" param for wrapping variables to `plotLongitudinal()`
#35
stufield
closed
4 months ago
0
Update `plotLongitudinal()` for additional features
#34
stufield
closed
4 months ago
0
Modify and update issue templates and md files
#33
stufield
closed
7 months ago
0
Bump year to 2024
#32
stufield
closed
4 months ago
0
Update pkgdown sidebar
#31
amanda-hi
closed
8 months ago
2
Update pkgdown sync
#30
stufield
closed
8 months ago
1
Update pkgdown sidebar links for consistency with other SomaLogic res…
#29
amanda-hi
closed
8 months ago
0
Update pkgdown sidebar
#28
stufield
closed
9 months ago
1
boxplotSubarray() produces a "dangling" boxplot legend when color.by=NULL
#27
amanda-hi
opened
9 months ago
0
Group boxplot subarray
#26
amanda-hi
closed
9 months ago
1
Plot longitudinal defaults
#25
amanda-hi
closed
4 months ago
4
Add grouping capability to boxplotSubarray()
#24
amanda-hi
closed
9 months ago
1
Fix links to themes vignette for pkgdown website
#23
amanda-hi
closed
10 months ago
0
Clean up TODO section in package vignette (Get Started)
#22
stufield
closed
10 months ago
0
Fix `vignette` syntax in README link
#21
stufield
closed
10 months ago
0
Update readme
#20
amanda-hi
closed
10 months ago
0
Review internal code chunks in README
#19
stufield
closed
10 months ago
1
Update to Makefile utilities
#18
stufield
closed
10 months ago
0
Modify "notch" argument of boxplotBeeswarm()
#17
amanda-hi
closed
10 months ago
0
Add vignette highlighting available color palettes and themes
#16
amanda-hi
closed
10 months ago
0
Add new plotting feature for median normalization scale factors
#15
stufield
opened
11 months ago
2
Add ROC curve functionality and associated support
#14
stufield
opened
11 months ago
0
Add plotting routine for creating "Manhattan" plots
#13
stufield
opened
11 months ago
2
Tweak GHAs to include snapshot triggers
#12
stufield
closed
11 months ago
0
Fix jagged df plot x list
#11
stufield
closed
11 months ago
0
Clean up Volcano Plotting functionality -> particularly `plotVolcanoHTML()`
#10
stufield
closed
11 months ago
0
Remove reference to `apt.data` in `plotVolcanoHTML()`
#9
stufield
closed
11 months ago
1
Clean up params for `plotVolcanoHTML()`
#8
stufield
closed
11 months ago
0
Fix `plotPDFlist()` and `plotCDFlist()` so that they can plot arbitrary length vectors
#7
stufield
closed
11 months ago
1
`plotVolcanoHTML()` tooltip AptName field is wrong in vignette
#6
amanda-hi
closed
11 months ago
1
Update plotConcord() snapshot unit tests
#5
amanda-hi
closed
12 months ago
0
Create short palettes/themes vignette
#4
amanda-hi
closed
10 months ago
0
Improved package vignette (Getting Started) for pkgdown
#3
stufield
closed
12 months ago
1
Clean up Getting Started vignette examples
#2
stufield
closed
12 months ago
0
Fix broken snapshot unit tests
#1
stufield
closed
12 months ago
1