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Loris-MRI
The set of scripts that preprocess and insert MRI data into the database.
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[run_defacing_script.pl] Defacing failing with error in register_processed_data
#982
zaliqarosli
opened
1 year ago
0
[mincs_to_bids_converter.pl] Error code 1
#981
zaliqarosli
closed
3 months ago
1
[minc_to_bids_converter.pl] Error code 55
#980
zaliqarosli
closed
3 months ago
3
[minc_to_bids_converter.pl] Error creating authors in dataset description
#979
zaliqarosli
closed
1 year ago
1
Change mkdir to make_path in run_defacing_script.pl
#978
cmadjar
closed
1 year ago
3
[imaging_non_minc_insertion.pl] Got a DB error when specifying an invalid upload ID on the command line
#977
nicolasbrossard
opened
1 year ago
0
Fix documentation of replicate raisinbread for MCIN dev tool
#976
cmadjar
closed
1 year ago
0
[tarchive_validation.pl] Warning obtained when -uploadID is not used
#975
nicolasbrossard
closed
1 year ago
0
Enforce use of -uploadID in script uploadNeuro/tarchive_validation.pl
#974
nicolasbrossard
closed
1 year ago
0
[batch_run_pipeline_qc_face_script.pl] Error running with QSUB on Ubuntu 22
#973
zaliqarosli
opened
1 year ago
2
update version to 24.1.11
#972
cmadjar
closed
1 year ago
0
[run_defacing_script.pl] Images not defacing
#971
zaliqarosli
closed
1 year ago
3
[EEG] extract archive script
#970
laemtl
closed
1 year ago
6
[bids_import] Images not found after import
#969
jeffersoncasimir
closed
1 year ago
4
[bids_import] Added check for 'HED' field to prevent KeyError
#968
jeffersoncasimir
closed
1 year ago
0
[EEG] extract archive script
#967
laemtl
closed
1 year ago
0
[petupload_cron_prod] Automatically create dirs
#966
laemtl
closed
1 year ago
0
Better handle bad configuration of S3
#965
cmadjar
closed
1 year ago
0
Fix handling of options provided to the push to S3 script
#964
cmadjar
closed
1 year ago
0
Return an error when `run_dicom_archive_validation/py` is run on an incorrect UploadID/tarchivePath combination
#963
cmadjar
closed
1 year ago
0
DICOM archive validation python crashes when run on inexistant upload ID
#962
cmadjar
closed
1 year ago
0
[edf_to_chunks.py] _get_info missing parameter
#961
laemtl
closed
1 year ago
0
Better handle wrong configuration of S3 bucket in push to S3 script
#960
cmadjar
closed
1 year ago
1
Push to S3 pipeline script - better handle options provided to the script
#959
cmadjar
closed
1 year ago
1
Chunking - add _get_info missing parameter
#958
laemtl
closed
1 year ago
1
[replicate_raisinbread_for_mcin_dev_vm.md] Fix description
#957
zaliqarosli
closed
1 year ago
0
`run_dicom_archive_validation.py` not returning error when providing wrong uploadID/tarchive path combination
#956
cmadjar
closed
1 year ago
1
Running dicom_archive_validation.py script on an inexistant upload ID make the script crash instead of returning appropriate error
#955
cmadjar
closed
1 year ago
1
[tools/get_dicom_files.pl] silently ignoring wrong id in resulting archive
#954
regisoc
closed
1 year ago
0
[Testing 25.0] python/run_push_imaging_files_to_s3_pipeline.pl
#953
cmadjar
closed
5 months ago
0
[Testing 25.0] python/run_nifti_insertion.py
#952
cmadjar
closed
5 months ago
0
[Testing 25.0] python/run_dicom_archive_loader.py
#951
cmadjar
closed
5 months ago
0
[Testing 25.0] tools/run_defacing_script.pl
#950
cmadjar
closed
5 months ago
1
[Testing 25.0] uplaodNeuroDB/mass_nii.pl and uploadNeuroDB/mass_pic.pl
#949
cmadjar
closed
5 months ago
0
[Testing 25.0] tools/minc_to_bids_converter.pl
#948
cmadjar
closed
5 months ago
1
[Testing 25.0] tools/remove_jiv_data_from_db_and_filesystem.pl
#947
cmadjar
closed
5 months ago
0
[Testing 25.0] tools/create_nifti_bval_bvec.pl
#946
cmadjar
closed
5 months ago
0
[Testing 25.0] tools/dicomDescribe.pl
#945
cmadjar
closed
5 months ago
0
[Testing 25.0] tools/seriesuid2fileid.pl
#944
cmadjar
closed
5 months ago
1
[Testing 25.0] tools/BackPopulateSNRAndAcquisitionOrder.pl
#943
cmadjar
closed
5 months ago
0
[Testing 25.0] tools/MakeArchiveLocationRelative.pl
#942
cmadjar
closed
5 months ago
0
[Testing 25.0] tools/mass_perldoc_md_creation.pl
#941
cmadjar
closed
5 months ago
0
[Testing 25.0] tools/database_files_update.pl
#940
cmadjar
closed
5 months ago
0
[Testing 25.0] tools/cleanupTarchives.pl
#939
cmadjar
closed
5 months ago
0
[Testing 25.0] tools/gzip_nifti_files.pl
#938
cmadjar
closed
5 months ago
0
[Testing 25.0] tools/get_dicom_files.pl
#937
cmadjar
closed
5 months ago
2
[Testing 25.0] tools/cleanup_paths_of_violation_tables.pl
#936
cmadjar
closed
5 months ago
0
[Testing 25.0] python/dicom_archive_validation.py
#935
cmadjar
closed
5 months ago
0
[Testing 25.0] python/mass_electrophysiology_chunking.py
#934
cmadjar
closed
5 months ago
1
[Testing 25.0] tools/batch_run_defacing_script.pl
#933
cmadjar
closed
5 months ago
1
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